Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0302 |
Symbol | |
ID | 6208527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 342008 |
End bp | 342793 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689924 |
Product | hypothetical protein |
Protein accession | YP_001817192 |
Protein GI | 182412126 |
COG category | [S] Function unknown |
COG ID | [COG5429] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.609493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCT CCGCTCGTCA TATTCGCCGG GCGCTGATCG CGATCGTGCT CGAAGTCTCC CTGGGATGCG CGGGCTTCGC GCAATCGTCG GCGATCGAGA TCCGCAGTCC CGCCCATCAC GTCACGCTGC TCGAGCTCTA TACGTCCGAA GGCTGCAGCA GTTGTCCGCC CGCAGAGGCC TGGGTTGGCG GTCTGCGCAA CGATGCGGGT TTGTGGACCG AGTTCGTGCC GCTCGCGTTT CACGTGGACT ACTGGGATCA CCTCGGCTGG CAGGATCCCT GGGCGGAACG GAGCTACGCG GATCGGCAGC GGCGGTATGC GGCGGAATGG GGCTCCGGCA CCATTTACAC GCCCGGATTC GTGCTCGACG GACGGGAATG GCGCGACTGG CGGAGCCAGC GCACCGCGCT GAAGGCGGTG GCCGCGAAGG CTGGTGTGCT GACCGCGTCA TCGACCGATG GCCGACAATG GGCGATCACC TTCGATGCCG CCGACGCACC GGATCGCGCC GACGTCCATG CCGCGCTGCT TTGGAGTGGC GTGCATTCCG ATGTGAAAGC TGGTGAAAAC CGCGGCCGGC ATCTGTCGCA CGATTTCGTG GTCGCCGCTC TGACGCGCGC CCCCCTCACC CGACGGGGCG ATGCGCTCCA CGGCGAGGTG GCGCTGCGAC CGGATCGGAA ACCTCCCGCC GAGGCCCGGC TCGCTCTGGC CGTGTGGGTC ACTCGCCCCG GCGAGTTGTC GCCGCTACAG GCGGCCGGCG GCTGGCTGCC TGGCGCCGCA GATTGA
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Protein sequence | MATSARHIRR ALIAIVLEVS LGCAGFAQSS AIEIRSPAHH VTLLELYTSE GCSSCPPAEA WVGGLRNDAG LWTEFVPLAF HVDYWDHLGW QDPWAERSYA DRQRRYAAEW GSGTIYTPGF VLDGREWRDW RSQRTALKAV AAKAGVLTAS STDGRQWAIT FDAADAPDRA DVHAALLWSG VHSDVKAGEN RGRHLSHDFV VAALTRAPLT RRGDALHGEV ALRPDRKPPA EARLALAVWV TRPGELSPLQ AAGGWLPGAA D
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