Gene Oter_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0229 
Symbol 
ID6206266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp254885 
End bp255358 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID641689850 
Product30S ribosomal protein S7 
Protein accessionYP_001817120 
Protein GI182412054 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCC GTCACAGAGC CGTCAAACGT CAGGTCGAGC CGGATATCCG TTACAAGAGC 
CCGCTCGTCG CGCACCTCGT CAATGTCATC ATGAAGAGCG GCAAGAAGAA CCTTGCCCAG
CGCATCGTTT ACGGCGCGTT CGAAAAGGTC TCCGAGAAAC TCGAGAAGGG CGATCCGGTC
GACCTGCTCC TCGGTGCGCT TGAGAACGCC CGCCCGCGGC TCGAAGTGAA GAGCCGCCGC
GTCGGCGGCG CCACCTACCA GGTTCCGATC GAAATTTCCT TCGAACGCCA GGAGAGCCTC
GCGCTCCGCT GGATCGTTGA CGCCGCCAGC GGCCGCAAAG GCATCCCGAT GAAAGAAGCC
CTGGCCGCCG AGATCATCGA CGCCTACAAC AACACGGGCA ACGTCGTCAA AAAGAAGGAA
GACACTCACA AGATGGCTCA GGCCAATCGT GCCTTTGCCC ACCTCCGCTG GTAA
 
Protein sequence
MSRRHRAVKR QVEPDIRYKS PLVAHLVNVI MKSGKKNLAQ RIVYGAFEKV SEKLEKGDPV 
DLLLGALENA RPRLEVKSRR VGGATYQVPI EISFERQESL ALRWIVDAAS GRKGIPMKEA
LAAEIIDAYN NTGNVVKKKE DTHKMAQANR AFAHLRW