| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0228 |
|---|
| Symbol | |
|---|
| ID | 6208827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 252673 |
|---|
| End bp | 254862 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641689849 |
|---|
| Product | translation elongation factor G |
|---|
| Protein accession | YP_001817119 |
|---|
| Protein GI | 182412053 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCTA CTGCCGCACC TGCTATTACT GTCGTCACTG ACAAGGCCAA GGTTTCCCCG
GTCAACGCCA AGGAGCGTCC GTTTCCGTTG GAATGGACGC GCAACATCGG TATTGCCGCG
CACATCGATG CCGGCAAGAC GACCACGACC GAACGCATCC TCTTTTATTC CGGCGCGGTC
CACAAGATGG GCGAGGTCCA TGAAGGCACC ACGGTGACCG ACTGGATGGA GCAGGAGCGT
GAGCGCGGGA TCACGATCAC CGCCGCCGCC ATTTCCTGCG CCTGGAATGC CTCCGTGGGC
CCCTGGAAGG GGATCAAGCA ACGGATCAAC ATCATCGACA CTCCCGGACA CGTCGACTTC
ACCGCTGAGG TGGAGCGCTC GCTCCGCGTG CTCGACGGCG CCGTCGCGGT ATTCTGCGCG
GTCGCGGGCG TGCAGCCGCA GTCCGAGACC GTCTGGCGTC AGGCCAACAA ATACAAGGTG
CCGCGGATCG CGTTCATCAA CAAGATGGAC CGCACCGGCG CCGACTTCTT CCGCGCGGTC
AAGGAAATGC GCGAGAAGCT CAAGGCCAAC GCGCACCCGC TATTTATTCC GATCGGCAAG
GAGGAGAACT TCCAGGGCGT GGTCGATCTC GTGCAGCAGG TGGCCTACCT GTTCGACGAG
ACCGATGCGC TGGGACTCAA CCCGGTGACG TCCGCGATCC CGGCCGATTT GATGGACCAG
GCCAAGGAGT ATCGCGACAA GCTGCTCGAA GCGGTGTCCG ATTTCGACGA CGTCATCGCC
GAGAAGTATC TGGGCGGCGA AGAGATTTCG GTAGCCGAGT TCATGCTCGC GATCCGCAAG
GCGACGGTGT CGCTGCAGTT CACCGGCGTG GTGCCAGGCT CGGCCTTCAA GAAGAAGGGC
ATCCAGCGGC TGCTGGACTG TGTGGTGAAC TACCTGCCCA GCCCGATCGA CGTTCCGCCC
ATGCAGGGGC AGGACAGCGA CGGCAAGACC ATCGATGTCG TCGTCGACGA CAAAGCGAAG
GTCGCGGGCC TGGCGTTCAA GCTCTGGACG GACCCGTTCG TCGGCAAAAT CGTTTTCTAC
CGCGTTTACA CCGGCATCCT CAACAAGGGC CAGTCGCTCT ACAATCCGCG CACCCGCCGC
AGCGAGCGCG TCTCCCGCCT CGTGCTTATG CGCGCGATGG ATCGTGAGGA AATTGACAAG
GCCTATTCCG GCGACATTTG CGCGCTGGTC GGCGTCAAGG AGGTCATCAC CGGTGACACG
CTGTGTGACG AGGATGTGGA TATCCGCCTC GAACCGCCGT CCTTCCCCGA GCCCGTCATC
TCGATGTCGA TCGAGCCGAA CTCAAAGGGC GACCAGGAGA AGATGGGCAC CGCGCTGCAG
CGGCTCGTCG CGGAGGATCC GACGCTGAAG GTCAAGACCG ACCCGGACAC CGGCCAAACC
ATTCTCGCCG GCATGGGCGA ACTCCACCTC GACATCATCC GCGATCGGAT GAAGCGCGAG
TTCAAGGTCG AGGCCACTGC GGGCAAGCCG CAGATCGCCT ACCGCGAAAC CGTCACCAAG
CTGGCGGACG GCGAGGGCAA GTTCATCCGC CAATCGGGCG GCAAGGGCCA ATACGGCCAT
GTGGTGGTCA AGATCGAGCC GAACGAAAAG GGTAAGGGCG TCGAGGTGAT CAACGAGATC
GTCGGCGGCG TCATCCCGAA GGAATTCATC AAGCCGTCGA CGGACGGTAT CCTCGAGGGC
ACCAACAACG GTGCGGTTGC CGGCTATCCG GTGGTCGACG TCAAGGTGCG GATCGTCGAT
GGTTCGTTCC ACGAAGTCGA TTCGTCCGAA CTCGCGTTCA AGATGGCGGG CATCTTCGCC
TTCAAGGACG CGATGAAGAA GGCCCATCCG ATCCTGCTCG AGCCCATCAT GGGCGTCGAG
GTCACCACCC CGGAAGAGTA CCAGGGCGAC CTGATGGGCG ACATCAATCG TCGCCGCGGC
ACGATCCGCG GCATCGAGAA CAAGGCGGGC GCGTGCATCA TCAACGCGCA CATCCCGCTC
GAGACGCTGT TCGGCTACGT CACGGACATT CGTTCGCTTT CCAAGGGCCG CGCCAGCGCG
TCCATCACAC CGTCCCACTT CGAGCAGGTG CCCAATTCGC TTCTGCAGAA GATCGTGGAA
ACCTCCACGA AAGCTCCGGC CCGCACGTAA
|
|---|
| Protein sequence | MSATAAPAIT VVTDKAKVSP VNAKERPFPL EWTRNIGIAA HIDAGKTTTT ERILFYSGAV
HKMGEVHEGT TVTDWMEQER ERGITITAAA ISCAWNASVG PWKGIKQRIN IIDTPGHVDF
TAEVERSLRV LDGAVAVFCA VAGVQPQSET VWRQANKYKV PRIAFINKMD RTGADFFRAV
KEMREKLKAN AHPLFIPIGK EENFQGVVDL VQQVAYLFDE TDALGLNPVT SAIPADLMDQ
AKEYRDKLLE AVSDFDDVIA EKYLGGEEIS VAEFMLAIRK ATVSLQFTGV VPGSAFKKKG
IQRLLDCVVN YLPSPIDVPP MQGQDSDGKT IDVVVDDKAK VAGLAFKLWT DPFVGKIVFY
RVYTGILNKG QSLYNPRTRR SERVSRLVLM RAMDREEIDK AYSGDICALV GVKEVITGDT
LCDEDVDIRL EPPSFPEPVI SMSIEPNSKG DQEKMGTALQ RLVAEDPTLK VKTDPDTGQT
ILAGMGELHL DIIRDRMKRE FKVEATAGKP QIAYRETVTK LADGEGKFIR QSGGKGQYGH
VVVKIEPNEK GKGVEVINEI VGGVIPKEFI KPSTDGILEG TNNGAVAGYP VVDVKVRIVD
GSFHEVDSSE LAFKMAGIFA FKDAMKKAHP ILLEPIMGVE VTTPEEYQGD LMGDINRRRG
TIRGIENKAG ACIINAHIPL ETLFGYVTDI RSLSKGRASA SITPSHFEQV PNSLLQKIVE
TSTKAPART
|
|---|
| |