| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0226 |
|---|
| Symbol | |
|---|
| ID | 6205268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 251577 |
|---|
| End bp | 252227 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641689847 |
|---|
| Product | ribosomal protein L3 |
|---|
| Protein accession | YP_001817117 |
|---|
| Protein GI | 182412051 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCAT CACTTTTAGG TAAGAAGATC GGGATGACGC AGGTCTACGA CGCACAGAAT
GTGCTCGTGC CCGTCACCGT GGTCGAAGCC GGCCCCTGTG CGGTCGTGCA GGTCAAGACG
ACCGAGACCG ACGGATACAA CGCGGTCCAA ATCGGCTTCG AGCAGAAAAA GGCGAAGAAC
GCCTCGCTCG CCGAGAAGAA CCACGCCGCC AAGGCCAGCC TCGCCGACGC TCCGCGCGTG
CTGAGCGAAG TGCGCCTCGA GGCCGCGCCG ACGTTGAAAG TTGGAGACGT GGTCAACGTC
ACCGCTTTCG CCGAGGGCCA GCTGGTCGAC GTCATCGGCG TAACCAAGGG CAAGGGCTTC
CAGGGCGTCG TGAAGCGCTT CCGCGTTGCG GGCGGTCCCG CCTCGCATGG CTCGATGTTC
CACCGCCGCA TCGGCTCGAT CGGCATGCGC CAGACGCCGG GCCGCACCTG GAAGAACCAG
GCCATGCCGG GCCACATGGG CCAGCTGAAG CGGACCGTAC AGAACCTCCG TGTGGTGAAA
ATCATTCCGG AAAAAAACCT CATCCTCGTG AAGGGGGCGA TCCCCGGCGC GAATGGCGAC
GACGTCATCG TCCGCTCCGC GATCAAGGGC CAGAAGCCGG CGCAAGCCTG A
|
|---|
| Protein sequence | MISSLLGKKI GMTQVYDAQN VLVPVTVVEA GPCAVVQVKT TETDGYNAVQ IGFEQKKAKN
ASLAEKNHAA KASLADAPRV LSEVRLEAAP TLKVGDVVNV TAFAEGQLVD VIGVTKGKGF
QGVVKRFRVA GGPASHGSMF HRRIGSIGMR QTPGRTWKNQ AMPGHMGQLK RTVQNLRVVK
IIPEKNLILV KGAIPGANGD DVIVRSAIKG QKPAQA
|
|---|
| |