Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0225 |
Symbol | |
ID | 6207469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 250926 |
End bp | 251558 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641689846 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_001817116 |
Protein GI | 182412050 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA CCGTTTTTAG TCCCGACGCC ACGAAGAGCA CCGAGCAGGA TTTCACCCTG CCGACGTTCG AGGGCGACAA AGGTCTCCAG GCCGTCAAGG AAGTGATCGT CGCGATCAAC GCCAACAACC GCCAGGGCAC GCACTCGACC AAGACCCGCG GCGAAGTTCG CGGCGGCGGC AAGAAGCCGT GGCGCCAGAA GGGCACCGGC CGCGCCCGCG CCGGCTCGAT CCGCTCCCCG CTGTGGGGCG GGGGCGGCGT CGTGTTCGGC CCGAAGCCGC GCGACTACTC GAAAAAAATC AACGCCAAGG TGAAGCAGCT CGCGTTCAGC CGCGCGCTCT TTGACCGCGC CTCCGCCGGC GAAATCGCCG TGATCGAGGC GTTCGACAGC AAGGCGACGA AGACCAAGGC CTTCAACCAG ATCCTCGGCC GCATCGCCCC CAAGGGCAAG GTGCTCCTGG TCGACGCACC GTTCGCTGCG GAGGCCGCTC GCGCCTCGCG CAACCTCGAG CGCGTGACGC TGCAGGAAGC CGCGAAGCTC AACACGCTCG ATCTGGCGCA GTACCAGAAA ATCATCGTCA GCAGCAAGGC GCTCGAAGCG ATCATCGCCC GCGTCAACGG AGGGAAGAAC TAA
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Protein sequence | MKLTVFSPDA TKSTEQDFTL PTFEGDKGLQ AVKEVIVAIN ANNRQGTHST KTRGEVRGGG KKPWRQKGTG RARAGSIRSP LWGGGGVVFG PKPRDYSKKI NAKVKQLAFS RALFDRASAG EIAVIEAFDS KATKTKAFNQ ILGRIAPKGK VLLVDAPFAA EAARASRNLE RVTLQEAAKL NTLDLAQYQK IIVSSKALEA IIARVNGGKN
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