Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0202 |
Symbol | |
ID | 6208160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 238081 |
End bp | 238692 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641689823 |
Product | ribosomal protein S4 |
Protein accession | YP_001817093 |
Protein GI | 182412027 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGTT ACACCGGTCC AACCACCCGC GTCAGCCGTC GCTTTGGCCA GCAGATTCTC GGCTCGGGCA AGGCCTTCGA ACGCCGCAGC TATCCGCCGG GGCAGCACGG CCCCAAACTT CGCCGCAAGG TGTCGGAATA CGCCGTCGGC CTGAACGAAA AGCAGAAGCT CCGCTACATC TACGGGCTGC TCGAGCGCCA GTTCCGGCGC GTGTTCGAGA TCGCCAAGAA GGAGCGCGGC GTCACTGGCG AGCGTTTCCT TCAGTTGCTC GAGACGCGCC TCGACAGCGT CGTCTATCTC CTCGGGCTCG CCAAGAGCCG CGCCGCCGCG CGCCAGTTCG TCAACCACGG CCACATCCGC GTGAATGGCC ACAAGGTCGA CATCGCGAGC TACAACGTGA AGGCCGGCGA CGAGATCGAG GTGAAGAACT CGCCCGCCTC GCGCCAGCTG GCCACCCGTT GCCTCGAAGA GAATCGTATC CGCAATGTCC CCGGCTGGCT CAGCATGAAC GCCGAAACGT TCAAGGCCAC GGTCAACCGC CTGCCCACTC GCGATGAGAT GGAACAGGGC ATCAACGAGC AGCTCATCGT CGAGTTCTAC TCGCGCTTCT GA
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Protein sequence | MARYTGPTTR VSRRFGQQIL GSGKAFERRS YPPGQHGPKL RRKVSEYAVG LNEKQKLRYI YGLLERQFRR VFEIAKKERG VTGERFLQLL ETRLDSVVYL LGLAKSRAAA RQFVNHGHIR VNGHKVDIAS YNVKAGDEIE VKNSPASRQL ATRCLEENRI RNVPGWLSMN AETFKATVNR LPTRDEMEQG INEQLIVEFY SRF
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