Gene Oter_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0202 
Symbol 
ID6208160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp238081 
End bp238692 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content64% 
IMG OID641689823 
Productribosomal protein S4 
Protein accessionYP_001817093 
Protein GI182412027 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0522] Ribosomal protein S4 and related proteins 
TIGRFAM ID[TIGR01017] ribosomal protein S4, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTT ACACCGGTCC AACCACCCGC GTCAGCCGTC GCTTTGGCCA GCAGATTCTC 
GGCTCGGGCA AGGCCTTCGA ACGCCGCAGC TATCCGCCGG GGCAGCACGG CCCCAAACTT
CGCCGCAAGG TGTCGGAATA CGCCGTCGGC CTGAACGAAA AGCAGAAGCT CCGCTACATC
TACGGGCTGC TCGAGCGCCA GTTCCGGCGC GTGTTCGAGA TCGCCAAGAA GGAGCGCGGC
GTCACTGGCG AGCGTTTCCT TCAGTTGCTC GAGACGCGCC TCGACAGCGT CGTCTATCTC
CTCGGGCTCG CCAAGAGCCG CGCCGCCGCG CGCCAGTTCG TCAACCACGG CCACATCCGC
GTGAATGGCC ACAAGGTCGA CATCGCGAGC TACAACGTGA AGGCCGGCGA CGAGATCGAG
GTGAAGAACT CGCCCGCCTC GCGCCAGCTG GCCACCCGTT GCCTCGAAGA GAATCGTATC
CGCAATGTCC CCGGCTGGCT CAGCATGAAC GCCGAAACGT TCAAGGCCAC GGTCAACCGC
CTGCCCACTC GCGATGAGAT GGAACAGGGC ATCAACGAGC AGCTCATCGT CGAGTTCTAC
TCGCGCTTCT GA
 
Protein sequence
MARYTGPTTR VSRRFGQQIL GSGKAFERRS YPPGQHGPKL RRKVSEYAVG LNEKQKLRYI 
YGLLERQFRR VFEIAKKERG VTGERFLQLL ETRLDSVVYL LGLAKSRAAA RQFVNHGHIR
VNGHKVDIAS YNVKAGDEIE VKNSPASRQL ATRCLEENRI RNVPGWLSMN AETFKATVNR
LPTRDEMEQG INEQLIVEFY SRF