| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0201 |
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| Symbol | |
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| ID | 6208752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 236967 |
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| End bp | 237968 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641689822 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001817092 |
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| Protein GI | 182412026 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC GTCTCGGAAA GTTCGAACTC CCGTCCAAAC TCACGAAGGT GGAGGAAGGC
TCTACGCCAA CCTACGCCAA GTTCATCGCT GAGCCTTTCG AGGCCGGCTA CGGTCATACC
ATTGGCAACT CTCTCCGTCG CGTTCTCCTC AGCTCCATCG AAGGTGCTGC CATCTCGTCC
ATCAAGATCG ACGGCGTTAA CCACGAGTTT CAGTCGATCG ACGGTGTCGT CGAGGACGTC
ACCGACATTG TCCTCAACCT GAAGAAGGTC CTGCTCGTCT CGCAGAAACG CGAGTCGATC
AATCTCGCCA TCCGGGTCAA CAAGGCCGGC ATCGTCACGG CCGCCGACAT CCAGCCCGAT
CCGAATATCC AGGTCATCAA TCCCGAGCAG GTCATCTGCA CGCTCGACGC GAAGAAGACC
TTCGACGCCG AGATCGAGAT CAAGACCGGC CGCGGCTATT GCCCCGGCGA GGCGAACAAG
AAGGAGGAGC AGGCCATCGG CGTCATTCCG ATCGACTCGC TCTTCTCCCC GGTCCGCCTC
GTGAAATACG CCGTCGAAGC GACGCGCGTG GGCCAGATCA CCGATTACGA CAAGCTCGTG
CTCGAAGTCT GGACCGACGG CCGGATCACG CCGGACGACG CGCTTAAGCA GGCGGCTTCG
ATCCTCAAGC ACCACCTCGA CGTGTTCGAT CGCGTCAGCG AGGAGACCTA CGAATTTGAG
AACCAGCAGT CCGAGGTCAG CGAGGAGCAG AACAAGCTCC GCAAGCTCCT CAACATGTCG
GTTAACGAGA TCGAGCTCTC CGTCCGCGCG GCCAATTGCT TGAACAACGC CAATATCACC
ACGGTCGGCG AGCTGGCGAT GAAGACCGAG CAGGAGATGC TCAAATACCG CAACTTCGGC
AAAAAATCCC TCAACGAGAT CAAGGAGAAG CTCGAGGCGC TGGGCCTGTC GCTCGGCATG
AAGTTCGACG AGCGGCTCCT CGACACGAAG AAGGAAGGCT GA
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| Protein sequence | MPKRLGKFEL PSKLTKVEEG STPTYAKFIA EPFEAGYGHT IGNSLRRVLL SSIEGAAISS
IKIDGVNHEF QSIDGVVEDV TDIVLNLKKV LLVSQKRESI NLAIRVNKAG IVTAADIQPD
PNIQVINPEQ VICTLDAKKT FDAEIEIKTG RGYCPGEANK KEEQAIGVIP IDSLFSPVRL
VKYAVEATRV GQITDYDKLV LEVWTDGRIT PDDALKQAAS ILKHHLDVFD RVSEETYEFE
NQQSEVSEEQ NKLRKLLNMS VNEIELSVRA ANCLNNANIT TVGELAMKTE QEMLKYRNFG
KKSLNEIKEK LEALGLSLGM KFDERLLDTK KEG
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