Gene Oter_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0179 
Symbol 
ID6208491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp215210 
End bp215722 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID641689800 
Producthistidine triad (HIT) protein 
Protein accessionYP_001817070 
Protein GI182412004 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATGG ACCACGATAG TCCCCGCTCG CATCCGCCCC GCGCCGCGAG GAGCGCCGAG 
CCCGTCCGCT CGCTACGGAG CCGCGACGCC CGCCACATTC GCCTCGCGGC GCCGAATAGC
TTTGAACTCT TCGCGTCCTT TCGCGTGATT CGCGGGCAGA TCCCGTCCGC CATGGCCAAG
ACTCTCTTCC AGAAAATCAT CGACCGGGAG ATTCCGGCGA AAATCGAATA CGAAGATGAT
CAGTGCGTGG TGCTGCACGA CATCGAGCCG CAAGCCCCGG TGCATCTGCT GATCGTGCCG
AAGAAGCCGA TTCCGCGCGT CGCGGAGGCA GCCGCAGCCG ACGAGCCGCT GCTCGGACAC
CTGCTGACAG TCGCCGGCAC CGTGGCGAAG AAGCTCAATC TCGCGCACGG TTTTCGGCTG
GTGATCAACA ACGGTCCGCA CGCCTGCGAA TCAGTGCCGC ACCTGCACGT GCACATGCTC
GCGCAGCGGC AAATGACCTG GCCGCCAGGC TGA
 
Protein sequence
MRMDHDSPRS HPPRAARSAE PVRSLRSRDA RHIRLAAPNS FELFASFRVI RGQIPSAMAK 
TLFQKIIDRE IPAKIEYEDD QCVVLHDIEP QAPVHLLIVP KKPIPRVAEA AAADEPLLGH
LLTVAGTVAK KLNLAHGFRL VINNGPHACE SVPHLHVHML AQRQMTWPPG