Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0132 |
Symbol | |
ID | 6208728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 159000 |
End bp | 159536 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689753 |
Product | paraquat-inducible protein A |
Protein accession | YP_001817023 |
Protein GI | 182411957 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.246044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.898845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAG ACCATCCGCC CGCAGCAAGG CATAGCGTCG CGCGCGCGAC GGCCCTGGCG ATCGCCGCGG CGATCTTGCT CGTGCCGGCG AACGTGCTTC CGGTGCTTAG CACGAGCAAC GCCGGAGAAG AACGCACGGA CACGATCTTC TCCGGCGCGA AAGCACTATG GGACGACGGC CTCTGGCCGC TCGCGGCCAT CGTCTTCCTC GCGAGTATCG TCATTCCGGT GCTGAAACTC GTCGGGCTGG GCTGGCTGCT CGTCGCCGCG CGGCGGCCGG TCGGACGCGC GCGAGCCCGG CGGCTCACGC GACTCTATGG CGCGCTGGAT TTCATTGGAC GCTGGTCGAT GCTCGACGTG TTTCTCGCGG CATTTTTGAC CGGCGTGGTG CGGTTCGGTC TGTTTGCGCA TGCGGAGGCG GAACCTGGCA TCGTCGCCTT CGCCGCGGCG GTGGTGCTGA CGATGCTGGC GACGCGGGCG TTCGCGCCCG CGGTTTTCTG GGAGCCGCGA GCCCGCTTGG AACGGATGCG ATCATGA
|
Protein sequence | MTADHPPAAR HSVARATALA IAAAILLVPA NVLPVLSTSN AGEERTDTIF SGAKALWDDG LWPLAAIVFL ASIVIPVLKL VGLGWLLVAA RRPVGRARAR RLTRLYGALD FIGRWSMLDV FLAAFLTGVV RFGLFAHAEA EPGIVAFAAA VVLTMLATRA FAPAVFWEPR ARLERMRS
|
| |