| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0120 |
|---|
| Symbol | |
|---|
| ID | 6206186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 144349 |
|---|
| End bp | 146382 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641689741 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001817011 |
|---|
| Protein GI | 182411945 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.487654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC GACGCCTCAG CTTGGAGCGC AAAATCCTTG TGCTCGTGCT CCTGCCTTTG
GTGGGAGCAC TCATCCCCGC CGGCATCATT TTGCAGCGCA CCCAGCGCGA GTTGACGGAA
ATCCGCGCTC TCGGGCAGCT GGCCGGACTC GTCTGGCAGC TCGGCGAGCT CGAGCGGCGC
GTGGATCAGG AAGGCACCAA CTGGTACTTT TTCAAGCCGA CCTGGAACGC CACCGAGGAG
GAACGCCGCT CCGAGCGCGT GAAGCAGGAC CAGTGGCGCA AGGAGACCGA TCAGGCGATC
GAGGATTATC ACCGGCTGCG CGCCGCCGTC GCAGGGGGTT CGTTGTCCGG GCCGCTGCAG
TCCGCGTTGC GCACCATCGA GCAGCACATC TCGGAGCTGC CGAAGCTGCG CCGGGTGGTC
GACACCCAGG TTGATGAAAC CGCCAGCCTG GGCATCATGG ACGGCTATCG GTCGTTCCGG
CGCGACATCA ATCTCGTGCT GCCGCTGCTC GTCGATGCGA CGACCAGTGA CGTGATCGTG
CGCAAACTCG CGGTGCTGCC CAAGCTGATG CTGGTCCGAA AGACGACGAT GGACGCGGGC
GGCATGATCT TCTTCTACCA CCAGCAGCGG GCGCAGAAGA CCGGACGGAC CTTCGTGCCG
AGTGAGGCTC TCACCCTCAC CCACAATCTC GAAATGGCGG AAGCGTATTG GGCAGACGTG
ATCGCGCTCA GCCAAGGCGA AGTGCGCACG CACCTGGACC AGATTCACTC CTCCCCTGAG
TGGAAAACCG TCGCCGAGCT GATGACCGGA CATGCGCAAG CAATGCTGAA TGGGACCGAG
CCGCCGATCG CAGGCGAGGA AGGCTGGGCG CCCAGCTGGG GGTTTCTTTT CGGCGGGCTC
GCGACCGAGA TCGCACAGCT GCGGGATGAT TTCACCCAGA CCTGCAACGC CGCCGAACGC
GCCGCACACG CCCGCCGGCT GTGGACGAGC GTGACGCTTG CGGCCGCCGT GCTGCTGGTG
CTGTGGCTCA CCCGCCGGCT CTGCCAGAGC ATCAGCCGGC CGATCTCCGC AACCGCCGAG
AACCTGCTCG CCGGCGCCAG GTCGGCCAGC GACGAATCCG CCGCCGTGCG CAAATCCTGC
GCCGTCGTTG CCGATGGTTC GGCGCACCAG GCCGCCGCCT TGGAGGAGAC CAGCGCTACC
CTGGAGGAAA TTTCCAGCAT GACGCGCAGC AACAGCGAAA ACGCGCAACG CGCCCAGCGC
TCGGCCAACG AGACCCGCGC CGCTGCCGAG CAAGGCGTGG GCCAGATGCA TCAGCTGACC
GACGCGATGG CCGCGCTGCG AACGTCGAGC GACGACGTGA CGCGCATCAT CAAGACGATC
GACGAGATCG CCTTTCAAAC AAACATCCTC GCCCTCAATG CCGCGATCGA GGCGGCCCGG
GCCGGCGAAG CCGGCGCGGG CTTCGCCGTC GTTGCCGACG AGGTGCGCAC ACTCGCCCAG
CGCAGCGCCC ACGCCGCTCG CGAAACGACC GACAAGATCA CCGCGGCCAG CGCGCGCACC
AACGCCGGTG GAGAAATCAC CCTGCAGGTC GCGCAATCGC TCGAGAGCAT CCTTTCTCGC
GCACGCGATT TGGAGAACGT GGTCAACGCG ATTGCGGAAG CCTCGCGCGA GCAGAATTCC
GGCATCGGTC AGATCACCGA CGCGATTCAA AAAATCGACC AGGTGACCCA AAGCAACGCC
GCTGCCGCCG AGGAGACCGC GGCTGCCGCC CATGAGCTTG AGACGCGCGC CGAGGCTTTC
ACCGAATCGG TGCAGCACCT CCGGACGATC GTATTCGGTT CGAGCTCTCT CCTCGACGAC
GTTTCGGGCC CGGTTCCCCG CAGCGCTTTG GACGCCGATG CGCCGGTGCC GGAAGTTTCG
GAGTCCGCCG GGCCCGCGCC GGCTGCTCGC GCCACCACGC CGATTCGTTC TTTGGGGACG
CCCGCCGGTG GCACGCCGAC GCTCGCCGGC GGGCGGTTGA GCAAAACGGA ATGA
|
|---|
| Protein sequence | MTIRRLSLER KILVLVLLPL VGALIPAGII LQRTQRELTE IRALGQLAGL VWQLGELERR
VDQEGTNWYF FKPTWNATEE ERRSERVKQD QWRKETDQAI EDYHRLRAAV AGGSLSGPLQ
SALRTIEQHI SELPKLRRVV DTQVDETASL GIMDGYRSFR RDINLVLPLL VDATTSDVIV
RKLAVLPKLM LVRKTTMDAG GMIFFYHQQR AQKTGRTFVP SEALTLTHNL EMAEAYWADV
IALSQGEVRT HLDQIHSSPE WKTVAELMTG HAQAMLNGTE PPIAGEEGWA PSWGFLFGGL
ATEIAQLRDD FTQTCNAAER AAHARRLWTS VTLAAAVLLV LWLTRRLCQS ISRPISATAE
NLLAGARSAS DESAAVRKSC AVVADGSAHQ AAALEETSAT LEEISSMTRS NSENAQRAQR
SANETRAAAE QGVGQMHQLT DAMAALRTSS DDVTRIIKTI DEIAFQTNIL ALNAAIEAAR
AGEAGAGFAV VADEVRTLAQ RSAHAARETT DKITAASART NAGGEITLQV AQSLESILSR
ARDLENVVNA IAEASREQNS GIGQITDAIQ KIDQVTQSNA AAAEETAAAA HELETRAEAF
TESVQHLRTI VFGSSSLLDD VSGPVPRSAL DADAPVPEVS ESAGPAPAAR ATTPIRSLGT
PAGGTPTLAG GRLSKTE
|
|---|
| |