| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0119 |
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| Symbol | |
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| ID | 6204365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 143023 |
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| End bp | 144120 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641689740 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001817010 |
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| Protein GI | 182411944 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2730] Endoglucanase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.432881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCGGC GTGAATTTCT GAAATCCTCC GCCGCCGCGG CGGCGGGCGT CCTTTTGTCC
TCTCGCGTGA GCGCGGCGGA GGCGGCGCGG CGGAGCCAGC CGCGGATCCC GCGTTGGCGC
GGCTTCAACC TCACGGAACT CGCCAGCGGT CGGCGCGGGC AGGCGTTTGT GGAGTCAGAC
TTCGCGTGGA TGGCCGAGTG GGGTTTTGAT TTCGCCCGGC TGCCGATGTC GTACTGGTCG
TGGTCCAGTG CCAATGACTG GATGAAAATC GAGGAGGATG CGCTGGCACC GGTCGATCAG
GCGATCGAGT GGGCGGCGCG ATACGGCATC CACGTCAACC TGAACTTCCA CCGGATCCCG
GGCTACTGCG TGAACGGCCG GGAGCGAGAG CCGTTTCAGC TCTTCGACAG TCCGCACGAT
GCGATGGCGC GGGCGCTGGA GGCCGCCGTG CATCACTGGC GTACGTTCGC CCAGCGTTAC
CGTGATATCC CGAGTTCGCG GCTCAGCTTC GATTTATTCA ACGAGCCGCC ATTCATGGCG
GACCACGACC GCTATGTCGA AGTGGCGCGC GCGCTGGTCG GGGCCATTCG CGAGGTTTCT
CCGGACCGGC TGATCTTCGC GGATGGAGCC GACATCGGTC AGACGCCCGT GCCGGGGCTG
GTCGAGTTGG GACTGGTGCA AAGCACGCGA GGCTATCTCC CGAAAATGGT CAGCCATTAC
ACGGCAACCT GGGTGCCGAA AAACGAGTTC GAGTCATTTG AGACGCCCAC CTGGCCGATG
GTCGCGGCGA ATGGCGAGCG CTGGGATCGC GAACGGCTGC GCCGCGAATT GATCGACAAA
TGGCAGCCGC TTGTCGCGCA GGGTGTCCCG GTGCACGTAG GCGAATGGGG CTGCTTCATC
AAGACCCCGC ACGCCGTGGC GCTGCGGTGG ATGACTGATC TGCTGTCGCT TTGGAAAGAA
GCCGGTTGGG GTTGGGCGAT GTGGAATCTG CGCGGCGGCT TCGGAATCGT CGACAGCGGC
CGCGCCGACG TGAAGTACGA GAGTTTTCAC GGCCACCAGC TCGACCGTGC GATGCTGGAA
TTGCTGCTCG CGCACTAG
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| Protein sequence | MNRREFLKSS AAAAAGVLLS SRVSAAEAAR RSQPRIPRWR GFNLTELASG RRGQAFVESD
FAWMAEWGFD FARLPMSYWS WSSANDWMKI EEDALAPVDQ AIEWAARYGI HVNLNFHRIP
GYCVNGRERE PFQLFDSPHD AMARALEAAV HHWRTFAQRY RDIPSSRLSF DLFNEPPFMA
DHDRYVEVAR ALVGAIREVS PDRLIFADGA DIGQTPVPGL VELGLVQSTR GYLPKMVSHY
TATWVPKNEF ESFETPTWPM VAANGERWDR ERLRRELIDK WQPLVAQGVP VHVGEWGCFI
KTPHAVALRW MTDLLSLWKE AGWGWAMWNL RGGFGIVDSG RADVKYESFH GHQLDRAMLE
LLLAH
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