Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0088 |
Symbol | |
ID | 6205805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 104003 |
End bp | 104764 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641689709 |
Product | hypothetical protein |
Protein accession | YP_001816979 |
Protein GI | 182411913 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.754127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.283193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACACT TTTTCACGCT GCTCAGTCAC GAGATCCGGA TGCTGCTCGT CAGCCCGGCG ACGTATTTCG TCGCGATGCT GTTCCTGCTC TTCATGGGCT TCATCTTCAC AGGCATCCTG GAAACCTACA GCAAGGCCGC GCGCGAGATT TCGCCCGCCA ACGTTTTCTT CCAGCTCTTC TGGTTCCCGG TCCTGTTCAT GGTCCCGCTG CTGACGATGA AATGCCTCGC CGAGGAACGG CGGCTCGGGA CGATCGAAAC GCTCCTCACC ACGCCGGTCA CCACGGCCGA GGTGGTGCTG GGCAAATACG CCGCCGTCTA CCTGCTCTAC CTGGCGCTCT GGGGCGCGAC CACCGGCTTC TTCTACATTC TGTATCGGTT CGTGGGCGAC ACGCGGTTCA TCGACATCGG GCCGATGATC GGCGGTTACA TTTTCATCGC GGTCTCCGGG CTGTTCTTCG TGGCGGTCGG CGTTTTTTCC AGTTCGCTCT CCCGGAACCA GGCGGTGTCC GGAGTGATCT GCTTCGTCCT GCTGGTGGCG GTCATCGGCG GAACCAACTA TCTCGCCGAC AGCGCGTGGC TGACGCGGGA CAGCCTGGCG CCGCTCAAGG AGGCCGTCGA TTACACGCGC GTGCTCGCGC ACCGCGACGA CTTCACCCGG GGCGTCGTCG ACACCCGCCA GCTGCTGTTT TACCTCAGCG GCACGGTGCT GGCGCTGATC TTCAGCATCC TCGGTGTCGA AGCCAAGCTG CTGCACTCAT AA
|
Protein sequence | MKHFFTLLSH EIRMLLVSPA TYFVAMLFLL FMGFIFTGIL ETYSKAAREI SPANVFFQLF WFPVLFMVPL LTMKCLAEER RLGTIETLLT TPVTTAEVVL GKYAAVYLLY LALWGATTGF FYILYRFVGD TRFIDIGPMI GGYIFIAVSG LFFVAVGVFS SSLSRNQAVS GVICFVLLVA VIGGTNYLAD SAWLTRDSLA PLKEAVDYTR VLAHRDDFTR GVVDTRQLLF YLSGTVLALI FSILGVEAKL LHS
|
| |