Gene Oter_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0087 
Symbol 
ID6208849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp102826 
End bp103851 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID641689708 
ProductABC transporter related 
Protein accessionYP_001816978 
Protein GI182411912 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.875685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.704785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACA CGCCAGCCAT CGAAGTCTCC CACCTGTTCA AGACCTACGC AGGGGTGGCG 
GCTGTCAGCG ACATCACCTT CACCGTCGCG CGCGGCGAGA TTCTGGGCTT CCTCGGTCCG
AACGGCGCGG GCAAGTCGAC CACGATGCGG ATCCTCACCG GCTACCTGCC GGCGACGTCC
GGCAGCGTCA CGATTTGCGG CCTGCCGGTC GCGTCGCAAC CCGACGAGGT GAAGCGCCGG
ATCGGCTACA TGCCGGAAAA CAATCCGCTG CCGGAGGACA TGCGCGTGTC GGAGTATCTC
TACTTCCGCG GCCGGCTGAA GGAGATCCCG CGCCGTAAGC TCGGCCCGCG CATCGACGAG
GTGCTCGAGG TATGCGATCT CAAGCGCGTC CGGCACAAGA TCATCGGGAA ACTCTCGAAG
GGTTTTCGCC AGCGCGTCGG CATCGCCGAA GCCATCCTCG CCGAGCCGCC GGTGATCATC
ATGGATGAGC CGACCATTGG GCTCGATCCG CACCAGATCC TGATCGTGCG CGACTTGATC
GCCAGCCTGC GCGGCCGGAT GACCGTGATC ATCTCCTCGC ACATCCTGCC GGAAATCGAA
GTCACGTGTG ACCGTGTGCT CATCATCAAC CAAGGCCGCG TCGTCGCGCA GGGCACGCCG
GCGGATTTGC GCCGCGAGAT CCTCGGCCAT TCGAACTACG AGCTCGAGAT CGCCGGTGAC
ACCAGCGCCT TGCCGCCACT GCTCGCCGCC ATCGAGCCGA CGCTGCGCAT ATCGGCCGAG
TCGGCCACCG ATGCCGCCGG GTTCCGGCGC GTGACGCTGA CCACCGATCG CGAGGACGAG
ATCGGCGAGC CGCTGCTGCG CGCGCTCACC GCGCAGAACT TCCGGTTGCG CAGCTTCAGC
CGCGCGCACT CCACGCTCGA GGACGTCTTC CTCGCCGCGA CGCGCCGCAG CTGGGATGTC
ACGGCCCCGC TGTCGCGTCC GCGCAAAGTG AAATCGGCGG CCATTAACAA GGAGGGAGCC
GGATGA
 
Protein sequence
MPDTPAIEVS HLFKTYAGVA AVSDITFTVA RGEILGFLGP NGAGKSTTMR ILTGYLPATS 
GSVTICGLPV ASQPDEVKRR IGYMPENNPL PEDMRVSEYL YFRGRLKEIP RRKLGPRIDE
VLEVCDLKRV RHKIIGKLSK GFRQRVGIAE AILAEPPVII MDEPTIGLDP HQILIVRDLI
ASLRGRMTVI ISSHILPEIE VTCDRVLIIN QGRVVAQGTP ADLRREILGH SNYELEIAGD
TSALPPLLAA IEPTLRISAE SATDAAGFRR VTLTTDREDE IGEPLLRALT AQNFRLRSFS
RAHSTLEDVF LAATRRSWDV TAPLSRPRKV KSAAINKEGA G