Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0087 |
Symbol | |
ID | 6208849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 102826 |
End bp | 103851 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641689708 |
Product | ABC transporter related |
Protein accession | YP_001816978 |
Protein GI | 182411912 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.875685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.704785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACA CGCCAGCCAT CGAAGTCTCC CACCTGTTCA AGACCTACGC AGGGGTGGCG GCTGTCAGCG ACATCACCTT CACCGTCGCG CGCGGCGAGA TTCTGGGCTT CCTCGGTCCG AACGGCGCGG GCAAGTCGAC CACGATGCGG ATCCTCACCG GCTACCTGCC GGCGACGTCC GGCAGCGTCA CGATTTGCGG CCTGCCGGTC GCGTCGCAAC CCGACGAGGT GAAGCGCCGG ATCGGCTACA TGCCGGAAAA CAATCCGCTG CCGGAGGACA TGCGCGTGTC GGAGTATCTC TACTTCCGCG GCCGGCTGAA GGAGATCCCG CGCCGTAAGC TCGGCCCGCG CATCGACGAG GTGCTCGAGG TATGCGATCT CAAGCGCGTC CGGCACAAGA TCATCGGGAA ACTCTCGAAG GGTTTTCGCC AGCGCGTCGG CATCGCCGAA GCCATCCTCG CCGAGCCGCC GGTGATCATC ATGGATGAGC CGACCATTGG GCTCGATCCG CACCAGATCC TGATCGTGCG CGACTTGATC GCCAGCCTGC GCGGCCGGAT GACCGTGATC ATCTCCTCGC ACATCCTGCC GGAAATCGAA GTCACGTGTG ACCGTGTGCT CATCATCAAC CAAGGCCGCG TCGTCGCGCA GGGCACGCCG GCGGATTTGC GCCGCGAGAT CCTCGGCCAT TCGAACTACG AGCTCGAGAT CGCCGGTGAC ACCAGCGCCT TGCCGCCACT GCTCGCCGCC ATCGAGCCGA CGCTGCGCAT ATCGGCCGAG TCGGCCACCG ATGCCGCCGG GTTCCGGCGC GTGACGCTGA CCACCGATCG CGAGGACGAG ATCGGCGAGC CGCTGCTGCG CGCGCTCACC GCGCAGAACT TCCGGTTGCG CAGCTTCAGC CGCGCGCACT CCACGCTCGA GGACGTCTTC CTCGCCGCGA CGCGCCGCAG CTGGGATGTC ACGGCCCCGC TGTCGCGTCC GCGCAAAGTG AAATCGGCGG CCATTAACAA GGAGGGAGCC GGATGA
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Protein sequence | MPDTPAIEVS HLFKTYAGVA AVSDITFTVA RGEILGFLGP NGAGKSTTMR ILTGYLPATS GSVTICGLPV ASQPDEVKRR IGYMPENNPL PEDMRVSEYL YFRGRLKEIP RRKLGPRIDE VLEVCDLKRV RHKIIGKLSK GFRQRVGIAE AILAEPPVII MDEPTIGLDP HQILIVRDLI ASLRGRMTVI ISSHILPEIE VTCDRVLIIN QGRVVAQGTP ADLRREILGH SNYELEIAGD TSALPPLLAA IEPTLRISAE SATDAAGFRR VTLTTDREDE IGEPLLRALT AQNFRLRSFS RAHSTLEDVF LAATRRSWDV TAPLSRPRKV KSAAINKEGA G
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