| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0079 |
|---|
| Symbol | |
|---|
| ID | 6208460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 90406 |
|---|
| End bp | 91176 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641689700 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001816970 |
|---|
| Protein GI | 182411904 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.340378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0805808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGC GCAACGGAAT CTGGACGGTC TTGGCAGTGG TGACACTGGG CTTCGCCGGG
GTGCTGGCGG TGCAGGCGCA ACGATCGCGG CAGCTGCACG CGGAGATCGC GCTGCTGCGC
GAGGAAGCAG CGAGCCTGCG AACGCTGTCC GCCGAGAACC AGCGGCTGCG CGCCGTACAG
CCAACCGCGA CCGAGTGGGC CGAGTGGCGG ACACAGGACG CCGAGCGCGT CCGTTGCGAA
AGCGAAATCG CCCAGCTGCG CGCCCGGCTC GCCGCAAAGC GCGCGACGAG TCACGCGGGC
GCGCCGGCGT TTCAACCGTC GCCGCCGATG CAGGCGAGTG CCTGGAACAA CGCGGGTCGG
GGCAGCCCGG AAGCGGTGTT GGAAACGGCG CTGTGGGCCG CCGCTGGCGG TGAGGTGGAG
ACGCTGGCGG ACACGCTGTT GCTCGACGCT GAGGCGCGAA CGCGCGCTGA GACGTTGCTC
GCAAGTTTGC CGCCGGCAGT GCGCGCGACC TACCGAACAC CCGAGCGGCT CGTCGCGCTG
CTGACGGCCC GCGAGGTGCC GCTGGGCTCG ATGCAATTCA TCGCGCGCAT GGAACGCGGC
GCCGACGTGC TTCTGCGCGT GCGGCTGCAG CAGCCCGACG GCAGCGCGAT CACGAAAAGC
CTGGTCGCAC GCGGCGGGCC GGGCGATTGG CGGCTGGTGG TGCCCGCGGG TGCGATCAGC
CATTTCGAGG CGGTGCTGCG CGGACCGGAA AGCGCGTCGC CCGTGCGCTG A
|
|---|
| Protein sequence | MSSRNGIWTV LAVVTLGFAG VLAVQAQRSR QLHAEIALLR EEAASLRTLS AENQRLRAVQ
PTATEWAEWR TQDAERVRCE SEIAQLRARL AAKRATSHAG APAFQPSPPM QASAWNNAGR
GSPEAVLETA LWAAAGGEVE TLADTLLLDA EARTRAETLL ASLPPAVRAT YRTPERLVAL
LTAREVPLGS MQFIARMERG ADVLLRVRLQ QPDGSAITKS LVARGGPGDW RLVVPAGAIS
HFEAVLRGPE SASPVR
|
|---|
| |