Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0069 |
Symbol | |
ID | 6208313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 81032 |
End bp | 81769 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641689690 |
Product | ROK family protein |
Protein accession | YP_001816960 |
Protein GI | 182411894 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.590227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.282068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC TCGGCATTGA CATCGGAGGG TCTGCGGTGA AAGGCGCACC CGTCGACCCC CGCACGGGCC GGCTGCTCGC GCCGCGGCTG CGGATCGCCA CGCCGGAGCC GTTGACGCCG CTGGCGATGA GCCGCGCCGT GGCGGAAATC GCGCGGCATT TTCGGTGGCG CGGGCGGATC GGCGTGGGCT TTCCCGGCGT GGTGCAAGGT TCGCGCACGC TGACCTCGGC CAACTTGCAC CCGCGATTCG TCGGCTGCGA TGCGGGGCGA CTGTTCGCCC AGGCGACGGG TTGTCGCGTG GCGTTGATCA ACGACGCCGA CGCCGCCGGA CTCGCGGAGG TGACGTTCGG CGCGGGTCGA CGCGTCCAGG GCACGGTGCT GCTCGTGACG ATCGGCACCG GGATCGGCAC GGCGGTGTTT TCCGGCGGCC GGCTGCTGCC GAACACCGAG CTGGGCCATC TGCCCTGGCA TGGACGCTCG GCGGAGCGCT ACGTGTCGTC GGCGGCGCGC AAGCGGCGCG GACTGAGCTG GGCCAGCTGG GCCCGCGAGC TGGGCGAATA TCTGCGCACG CTCGAGCGGC TGCTGTGGCC GGAGCTGATC GTGCTCGGCG GCGGGGCGAG TTCGAAGAGC GACAAGTTTA TCCGGCACGT GCGCTGTCGC GCGAAGCTGG TGGTGGCGTC GTCGGGCAAC GAGGCGGGGA TCGTCGGCGC GGCCCTGTGT GCGGCCGAAC CGGGTTGA
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Protein sequence | MKTLGIDIGG SAVKGAPVDP RTGRLLAPRL RIATPEPLTP LAMSRAVAEI ARHFRWRGRI GVGFPGVVQG SRTLTSANLH PRFVGCDAGR LFAQATGCRV ALINDADAAG LAEVTFGAGR RVQGTVLLVT IGTGIGTAVF SGGRLLPNTE LGHLPWHGRS AERYVSSAAR KRRGLSWASW ARELGEYLRT LERLLWPELI VLGGGASSKS DKFIRHVRCR AKLVVASSGN EAGIVGAALC AAEPG
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