Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0066 |
Symbol | |
ID | 6207699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 78116 |
End bp | 78712 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641689687 |
Product | cyclase/dehydrase |
Protein accession | YP_001816957 |
Protein GI | 182411891 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.364974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.163087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACAT CTCCTGCGAC CCGGCAGCAA ACGGCTGATC GGTCTGAACT TGTCGATAAA CCCCGGGCCA AGATTGCCGT TCCCGGCAAT CATGGCGTCA AGGTGGTGCG AGCGTGCACC ATCCGCCGCC CGGCCGCCGA ACTCTACCAG TTCTGGCGCT CGCTCGAAAA CCTCACGCGC ATCATCAAGC ATCCCGTGGC GATCACGCGC CTTTCGGACA CGGAATCGCA TTGGGCGGTC AGCGCCCCGG GCGACCGGAT GGTGGAGTGG GACGCGGTGA TCATCAACGA CGCGCCGGAC CGGCTGATCG CATGGCGATC CAAGGATGGC GCCGAAATCC GCAACGCGGG CAGCGTGCGC TTCGAGCGCG CGCCGGGTGA CGAAGGTACG GAAGTCCGCG TGCAGCTCGA ATACGATCCG CCCGGCGGCA AGCTGGCCGC ATGGGTGGCC AAGCTCACCG GCGAGGAGCC GGAGCAACAG GTCGCCGAGG CGTTGCGCCG GTTCAAGGCA TTGATGGAGG CCGGGGAGAT TCCGACCATC GAGGGACAAT CCGTCGGCGA ACCGCAGCGC AGCGCGAAGC AGAAAGGCCA GTCATGA
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Protein sequence | MATSPATRQQ TADRSELVDK PRAKIAVPGN HGVKVVRACT IRRPAAELYQ FWRSLENLTR IIKHPVAITR LSDTESHWAV SAPGDRMVEW DAVIINDAPD RLIAWRSKDG AEIRNAGSVR FERAPGDEGT EVRVQLEYDP PGGKLAAWVA KLTGEEPEQQ VAEALRRFKA LMEAGEIPTI EGQSVGEPQR SAKQKGQS
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