Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0038 |
Symbol | |
ID | 6205003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 47264 |
End bp | 50395 |
Gene Length | 3132 bp |
Protein Length | 1043 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641689659 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001816929 |
Protein GI | 182411863 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.11404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGG CGGTGTATTG CCGCACGACG ACCGTTTTCG GCCTCCAGTA TGATGCTCCG TTCGCGCTGC TCCTGCCGGT CACGTTTGTG AGCGCGTGGT TCGGGGGCGC GCGGGCGGGC CTACTCGCCA CCGTGGGCGG CGCCCTGGTC GGCGTCTACG CCGGCTCGTC CACGACCGGC CTGGACTCTG CCATCGTCTC CCGCCTGTTG CTGTTCGTGG CCAACGGCGG GATCATCACC GGCCTGTGCG TCGCGCTGCA TTCGGCGCTG CGACGGTCGC GCGTCGCCCG CGACGAAGCC GCGCGCAATT TCGAAATCAT GGCGAACAAC GCGCCGGTGC TGATCTGGTC CACGGGCGCG GACGGTTGCT GCGCGTTCGT GAACCGCAAT TGGGTCACGT TCACCGGCCG CGCGAGTGAA CCGCATGGCC GGCGCCCCGG CCAATTGCAC CCCGCCGACG CGGCGCGTTA TCACGCCGTT TCGACCGAGG CGATGGCCGC CCGCAAGCCC TTCCGCATCG AATACCGGCT GCGCCGCGCC GACGACACCT ACCGCTGGTT ACACGAGTAC GCCGTGCCCC GCTTCGACCA GGACGGCGAG TTCGAAGGCT ACATCGGCTC CTGCAACGAC GTCACCGATT CGCGCCACGA GCGCGAGGAA CTCGCCTTCA TCGCGCGGCT GCAGGCGGCG CTCACCGAAT CGCTCGATCT CGACAAGTGC GCCGACGTGC TCGGGCAGGC GTTCGTCCCG CGGATCGCGG ACTGGTGTTC CATTCATCTC GTCAACGACG CGGGGAAGCT CGAACTCGTG CGGCTGCAGC GCAACGACCG CGTTCCCGCC GGCGGCGTGC CGCGGCCCGC CGCGGCCCCG GACAGCCTGG AGCAGCGCGT CGTGCGCGAA GGTGCACTCG TGCAGCTCAC CGGCCCGGAC GAAGCGCTGC TCCGCACGCT CGCGGCCGAC GAAGCCCAGC TCGAGCGACT GCGCGCCACG CCGGACATCA CCTACGCCGG CGTACCGCTG CGTGCGCGCG GGGCGATCAT CGGCGTGCTG GCGCTCGCCA CGCTCGCCTC GGGGCGGCGG CTCGGCGCCG AGGAATGCGA ACTCGTGCGC AAGATCGCCG GGATCGCCGG CCTCGCCCTC GACAATGCCC GGCTCTATCG CAGCGCCTGT CAGGCCGCCG CCGCCGAGGC CCAGGCGTTG CGCGAAGTGG AGCGCAGTGA GCAGCGATTC CGGTTCATCT GGGAGGCCAA TGTGTTTGGC ATCGGCACGG TCGCTCGCTC CGGGCAGATC CTGACCGCCA ACGGCACGCT GGCCCAACTC CTCGGTTACA CGCAGGACGA CGTCGCGGCC GGCCGCGCCA GCATGAACGA GCGCACCGCC CCCGGCTGGC ACTTCGTCGA CATGCACACT GGCGAGGAAC TGGTCCGCAC CGGCCGTTGC GCTCCCTACG AAAAGGAATA CGTCCGGCCC GATGGCGCGC GCGTGCAGGC ACTCGTCTGT GGCATGGTCC TGCCGCAAAC CGACGAGTCG CTCGTGTTCG TGCTCGACCT CACCGCGCAG AAGCACGCCG AGCGCGCCCT CGACCGCCAA AGCCTGCTGC TCAAGACCAT CATCGATGCG ATGCCCGCGA TGGTCGGCTA TCTCGGACTC GACGAACGCT TCCAGCTGCA CAACGAGAAA TATGCGAAAT GGCTCGGGGT GGACGGTTTC GCCATCCAGG GACGGACGAT GCGCGAGCTC GTCGGCGACG AGGCCTACCC GCGCATCGCG CCTTACCTCC GCGCCGCGTT CCGCGGCCGG AACATGCGGC ACGAAACCAC CCTGCGCACT GGCGACCGGG AGCGTCACCT CATCGCAAGC TACCGGCCCG ACCGCGACGC CGACGGGCGC GTGTGCGGAG TGGTGATCCA CGCGTACGAC ATCACGGAGC GAAAGGAGAC CGAGCAGGCG CTCGCCGAGG CTCTCACCCG CTATCGCTTC CTCGCTGACG CCATGCCGCA GATGGTGTGG ACGGCGCTGC CGGACGGACA ACCCGACTAC GTCAACCGCC GCTGGCTGGA AACGACCGGC ATGACCGAGG CGGCGTCGCT CGCGCGCGAC GGCTGGCTCG AGGCGGTACA TTTCGAGGAT CGCGCGATCA CGCGCGAACT CTGGCATCGC GCAGTCGCGC AGTGTGTCCC GTTCGAGCAC GAGTGCCGGC TGCGCTGCGG CAAAAATCCC ACCTGGCGCT GGCATCTCGT GCGCGCGCTG CCCCGCCGCG ACGATCACCT GGCCGTCGTC CAGTGGGTCG GCAGCGCCAC CGACATGGAC GAGCAGCGCC GGGCCTATGC CGAACTCGAC GAAGCCCGCG CGCGCCTCAA GTCCCACGCC GAGGAACTCG AGGCACGCGT CCGGATGCGC ACGGCGACAC TGCGGGAAGC GAACGCCGAA CTCGAGGCGT TCACCTATTC TGTCTCCCAC GACTTGCGCA CGCCACTGCA GTTCGTCCGC GGTTTCGCGG AGGCGATCCG CACCGATGCC GGCGCCACGC TTTCGGCCGA AAACCGCGAC TACCTCCAGC GCATCATCCG CGCGGCGACG CGGATGGATA CGATCATCCA GGACCTTCTT TCCTACAGTC GGCTCGCCCG CACGGATCTG CAACTGGCGG AACTGCCGCT CGACGACGTG ATCTCCGACG TGCTCGCCAA CCAGCACGCG ATGATTCGCC AAACGTCGGC GCGGGTGTCC GTCGACAGCC CCTTGCCCAC CGTGCGCGCG GATCGCACCG GCCTCTTTCA GGCGATCTCC AATTTGGTTT CCAACGCGCT GAAATTCACC CGCGCCGGGC AGCCGCCAGT CGTGCGCATC CGCGCCGAGG TGTCGGAGCG TGGCGTGCGG CTCTGGGTCG AGGACGAAGG CATCGGCATC GACCCGCGGC ATCACGAACG AATCTTTGGG CTTTTCGAAC GGTTGCACAG CCCCGGCGAA TACCCGGGCA CCGGCATCGG GTTGTCGCTC GTACGCAAAG CGGTCAGCCG CATGGGCGGC AGCTGCGGGC TCGAGTCGGT CCCGGACGCC GGCAGTCGCT TCTGGATTGA ATTCCCCGCG GTGAACGCCG TGTTGCCCGC TGTCGCGCAT GCTACCGCTT GA
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Protein sequence | MGAAVYCRTT TVFGLQYDAP FALLLPVTFV SAWFGGARAG LLATVGGALV GVYAGSSTTG LDSAIVSRLL LFVANGGIIT GLCVALHSAL RRSRVARDEA ARNFEIMANN APVLIWSTGA DGCCAFVNRN WVTFTGRASE PHGRRPGQLH PADAARYHAV STEAMAARKP FRIEYRLRRA DDTYRWLHEY AVPRFDQDGE FEGYIGSCND VTDSRHEREE LAFIARLQAA LTESLDLDKC ADVLGQAFVP RIADWCSIHL VNDAGKLELV RLQRNDRVPA GGVPRPAAAP DSLEQRVVRE GALVQLTGPD EALLRTLAAD EAQLERLRAT PDITYAGVPL RARGAIIGVL ALATLASGRR LGAEECELVR KIAGIAGLAL DNARLYRSAC QAAAAEAQAL REVERSEQRF RFIWEANVFG IGTVARSGQI LTANGTLAQL LGYTQDDVAA GRASMNERTA PGWHFVDMHT GEELVRTGRC APYEKEYVRP DGARVQALVC GMVLPQTDES LVFVLDLTAQ KHAERALDRQ SLLLKTIIDA MPAMVGYLGL DERFQLHNEK YAKWLGVDGF AIQGRTMREL VGDEAYPRIA PYLRAAFRGR NMRHETTLRT GDRERHLIAS YRPDRDADGR VCGVVIHAYD ITERKETEQA LAEALTRYRF LADAMPQMVW TALPDGQPDY VNRRWLETTG MTEAASLARD GWLEAVHFED RAITRELWHR AVAQCVPFEH ECRLRCGKNP TWRWHLVRAL PRRDDHLAVV QWVGSATDMD EQRRAYAELD EARARLKSHA EELEARVRMR TATLREANAE LEAFTYSVSH DLRTPLQFVR GFAEAIRTDA GATLSAENRD YLQRIIRAAT RMDTIIQDLL SYSRLARTDL QLAELPLDDV ISDVLANQHA MIRQTSARVS VDSPLPTVRA DRTGLFQAIS NLVSNALKFT RAGQPPVVRI RAEVSERGVR LWVEDEGIGI DPRHHERIFG LFERLHSPGE YPGTGIGLSL VRKAVSRMGG SCGLESVPDA GSRFWIEFPA VNAVLPAVAH ATA
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