Gene Oter_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0020 
Symbol 
ID6206836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp23235 
End bp23906 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content63% 
IMG OID641689641 
Producthypothetical protein 
Protein accessionYP_001816912 
Protein GI182411846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.444219 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.221599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCC CGCGATCCCT GTGCACGATT ACTCTGCTCA CGGCCGTCGC CTTGACTTCC 
CCTGTCGGCT CGGCCGCGGC TCCGATCGAG CCTGACCTGA AAGGACTGCC CACTGGCACC
GGCTGGCGGT TTTTCAACCG CACCGCCGTG ATGCTCGATG AACCCGGTCG CACCGCCATT
CGTCTGACCG GCGGCGCCGG ACTGGGCCTC GCGATCCTCG ACGGGTTCAG CTTCCAGGAA
GGAACCATCG AATTCGACGT GCGCGGCAAA GCTCCGCCCA CCGAAAGCTA TGTCGGTCTC
GCTCTGTTCG GCATCGACGA AACCACCTTT GACGCGGTCT ATTTCAAGCC GTTCAATTTC
ATCAGCGATG ACGAGGTGCG GCGCAGCCGC GCCGTGCAAT ACGTCGCGAT GCCGACTTAC
AACTGGGCGC AGCTGCGCAA GCGCTACCCC GGCATGCACG AACGGCCGGT GATGCCCGTG
CCGGATCCCG CCGGCTGGTT TCACGTCACG ATCGTGGTCG GCGCCGGCCG GATTCGCGCC
TTCGTCGAGA ACAGCTCCGA ACCGTGCCTG GATATCAAAA AGCTGAGCAC GCAGGACCGG
GGTTGGATCG CGTTCTGGGT CAGCAATGGA TCGGAAGGCG ACTTCGCGAA TCTGAAGATA
ACCGTGCCCT GA
 
Protein sequence
MPTPRSLCTI TLLTAVALTS PVGSAAAPIE PDLKGLPTGT GWRFFNRTAV MLDEPGRTAI 
RLTGGAGLGL AILDGFSFQE GTIEFDVRGK APPTESYVGL ALFGIDETTF DAVYFKPFNF
ISDDEVRRSR AVQYVAMPTY NWAQLRKRYP GMHERPVMPV PDPAGWFHVT IVVGAGRIRA
FVENSSEPCL DIKKLSTQDR GWIAFWVSNG SEGDFANLKI TVP