| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0018 |
|---|
| Symbol | |
|---|
| ID | 6206054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 21762 |
|---|
| End bp | 22343 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641689639 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001816910 |
|---|
| Protein GI | 182411844 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.215123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.56065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT CTTTGCCTCG TCGCGAATTT CTCCGCGTCG CCGCCGGCGC CGCGTTGCTC
GGGTCCTCCT GCCGCTTGCT CGCCCAAACG CCCACGCCGA CCGCCGCCAC CGCGCCCGAG
TCCGAAGAGG TCGCCCGGCT CAAGCGCCAG CTCGAAGCGC AGCGCGCCGG CTCGATCCGG
CTGCTCATCG AGCTCTACGA CAAGCACGGC GCGCCGCTCC TCGACACGAT CGCGGCGTTC
ACCGCAGCGG AGTGGCAGGC GCGGCTCGAG CAGAGACCGT TCTCCGGCCC ACGCGACCTG
CAGGCGGTCA AAACCGGTTT GTGGTCCACG CTGCCGCCCA GCTTCAAATT TGAGACGCTC
GAGGACACCC CGCAGCGGCT GCGTTTCCGG GTGACGGAGT GTCCCGTAGC GGCCGAGATG
AAGCAGCGGC AGGTGCCGCC TGCGCTCGGC TACGCGCTCA ACTGCGCCTC CGATTCCGGC
GTCGCCGCGG GGGTGAACCC GCAGATCAAG TTCTCCCGGA CGAAGACGCT GATGCAGGGC
GACGAGTGTT GCGATCACTG CTACGAGTTC GCTGCCACCT GA
|
|---|
| Protein sequence | MNTSLPRREF LRVAAGAALL GSSCRLLAQT PTPTAATAPE SEEVARLKRQ LEAQRAGSIR
LLIELYDKHG APLLDTIAAF TAAEWQARLE QRPFSGPRDL QAVKTGLWST LPPSFKFETL
EDTPQRLRFR VTECPVAAEM KQRQVPPALG YALNCASDSG VAAGVNPQIK FSRTKTLMQG
DECCDHCYEF AAT
|
|---|
| |