Gene Oter_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0013 
Symbol 
ID6207701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp17133 
End bp17576 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID641689634 
Productsignal-transduction protein 
Protein accessionYP_001816905 
Protein GI182411839 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.371187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC CCATCTCGGC TTTGCTGGAT CGCAAAGGAT CGGTCGTCTT TTCCGTGCCC 
TCGAACGTCA CCGTATGCGA CGCGGTGAAC GAGATGAACC GTCATCGGAT CGGCTCGATC
GTCGTCCTCG AGAACAGCAG CCCCATCGGG ATCTTCACGG AGCGTGACGT GTTGCGCCGC
GTCGTCGGCG AAGGCGTCGA CCCCAAGCGC ACGCCGGTCA ACCAGGTGAT GACCGCACGA
CCGATCACCA TCACGCCCGA GACCACCATC GAGCAAACGA TGACGCTCTT CGCCGAGAAA
AACTGCCGGC ACCTGCCCGT GCTGGTCAAC GGCAAGCTCG TCGGGCTGAT CTCCATTGGC
GATATCTCGC GCTGGATGGC CGACACGACC CGCGCCGAAG CCGAGCATCT GAAAAACTAC
ATCGCCGGCG GCTACGGCGC GTAG
 
Protein sequence
MNTPISALLD RKGSVVFSVP SNVTVCDAVN EMNRHRIGSI VVLENSSPIG IFTERDVLRR 
VVGEGVDPKR TPVNQVMTAR PITITPETTI EQTMTLFAEK NCRHLPVLVN GKLVGLISIG
DISRWMADTT RAEAEHLKNY IAGGYGA