| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_0008 |
|---|
| Symbol | |
|---|
| ID | 6208215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 9221 |
|---|
| End bp | 9727 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641689629 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001816900 |
|---|
| Protein GI | 182411834 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0602923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC CGCCGCTGCT GCCCGAAGAA ACGTATCACC GGGTGTTGCG CGTGGCCTAC
CTGGATGGCC TGAGCGTGCT GGCGGTGGCC GGGCTGCTGG CGCTGGCGGC GGCGTCCATG
CGCGACGTGC CGAATACCGG CATCGGCATG CTCGTCGCTG CGGCGGGCGC GATCGAGCTG
CATGGGGTGT CGCTGTTGCG GGCCGGAGCC TCGCGCGGAA TGAAATGGGT GATCGCGAGC
CAGCCGTATC TCTGGTTCGT GCTCATCAGC TACTGCATGG TGCAGCTGAC GATTCGTGAT
CTCGAGCCGT TGCGCGATGC GATCAAGATC GGCGCGCCCG GTGGTTTGGC CGCGCAGGGA
ATCACGGAGG AGCAGTTCGC CACCCTGGTG TATACGCCGA TGTATGTCGC GCTCGCGGTG
GGCACCACGC TGCTGCAGGG CGGGATGACG CTCTACTATT GGCGGCGGCG TCAGGCCGTG
GTCGCGGCGT TGGAGGAAGA GGAATGA
|
|---|
| Protein sequence | MKLPPLLPEE TYHRVLRVAY LDGLSVLAVA GLLALAAASM RDVPNTGIGM LVAAAGAIEL
HGVSLLRAGA SRGMKWVIAS QPYLWFVLIS YCMVQLTIRD LEPLRDAIKI GAPGGLAAQG
ITEEQFATLV YTPMYVALAV GTTLLQGGMT LYYWRRRQAV VAALEEEE
|
|---|
| |