Gene Oter_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_0001 
Symbol 
ID6204343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp20 
End bp1423 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content63% 
IMG OID641689621 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_001816893 
Protein GI182411827 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTG TGTCCCTTTC GCCCAGCCTC TGGGAGACCG TAAAATGCGA CTTCAAGGAA 
CTGTTTCCTG AAGACGTTTT CCAGATGTGG TTCGAGCCGA TGGTGTGCCT CGAAGCCACC
GAGGATTCGA TGGTCTTGGG CGTGCCCAAC GATTTCGCGG CGATCTGGAT TCACGACAAC
TATCTCGACC TGATCACGCA GCGGCTGCGG CTGACGGCGG GCCGGCTGGT GAATGTTACG
CTCAAGAAAA GCGACGCGGC CCAGGCGCCC GCGCCGGCTT TCGCCAACCA TCGCGCGACC
ACCGCCGCGC TCGAGCCCGC GCATCGCGGC CGCACCGCGA CGCCGCGCCG TAACGGACGC
TACGACGACC GGAGCGTCGC CGCGGCCACG CTGAACCCGC GCAACACGTT CGAAACGTTC
GTCGTCGGTT CGAACAACCA GATGGCGCAC GCCGCCGCGC TCGCCGTCGC GCAGGCCCCG
GCGCAGGCCT ACAATCCCCT CTTCATTTAT GGCGACACCG GGCTGGGCAA AACTCACCTG
ATGCACGCCA TTGGCCACGC GATCCTGCGT AACAACCCCG ACGCGCGCGT GGCCTACCTT
TCGACGGAGA AGTTCACCAA CGAGTTCATC CAGGCACTGC AGGAGAACAG CCTCACGAAG
TTCCGCCAGC GCTACCGCCA CGTCGACGTG TTGCTGATCG ACGACGTGCA GTTTCTCGCC
GGCAAGGAGC GGATCCAGGA GGAATTCTTC CACACCTTCA ACGACCTGTT CGAGTCCGGC
AAACAGGTGG TGCTCTCCAG CGACCGCCGC GCGAGCGAGA TTCAGAAGCT CGAGTCGCGG
CTCGTGTCGC GCTTCGAATG GGGCCTGCCC GCCGATATCC AGGCGCCCGA TTTCGAGACG
CGCCTCGCGA TCCTGCGCAG CAAGGCGGCG TGCATGAAGT TCGACCTTCC GGCGCCGATC
CTGAACTTCA TCGCCCAGAA TATCTCGAAA AACATCCGCC GGCTCGAGGG CGCGCTGATC
AAGGTCGCCA GCTACTCTGC GCTCACCAGC AAACCGCTCG ACCTGGCCAC GACCGAGATG
CTGCTGCAGG ACGTGCTCAT GGAACAGGCG CAGAACGTCC TCACGATCGA GACGATTCAG
AAACGCGTGG CCGATCACTA TCAGATCCGG CACAGCGACA TGACCAGCAA GCGCCGGCCC
AACAACATCG CCATCCCGCG CCAGATCGCG ATGTATCTGA CGCGCACGCT GACGAAGCAC
TCTCTCCAGG AGATCGGCGA GGCCTTCGGC GGACGCGATC ACGGCACCGT GATTCACGCC
TGCAAGGCCG TGGACAACAT GATGGAGCAG GACTCCACCA CGCGCGGCAG CATCGACTTC
CTGAAAGCGC AGCTGTCGAA GTAG
 
Protein sequence
MSSVSLSPSL WETVKCDFKE LFPEDVFQMW FEPMVCLEAT EDSMVLGVPN DFAAIWIHDN 
YLDLITQRLR LTAGRLVNVT LKKSDAAQAP APAFANHRAT TAALEPAHRG RTATPRRNGR
YDDRSVAAAT LNPRNTFETF VVGSNNQMAH AAALAVAQAP AQAYNPLFIY GDTGLGKTHL
MHAIGHAILR NNPDARVAYL STEKFTNEFI QALQENSLTK FRQRYRHVDV LLIDDVQFLA
GKERIQEEFF HTFNDLFESG KQVVLSSDRR ASEIQKLESR LVSRFEWGLP ADIQAPDFET
RLAILRSKAA CMKFDLPAPI LNFIAQNISK NIRRLEGALI KVASYSALTS KPLDLATTEM
LLQDVLMEQA QNVLTIETIQ KRVADHYQIR HSDMTSKRRP NNIAIPRQIA MYLTRTLTKH
SLQEIGEAFG GRDHGTVIHA CKAVDNMMEQ DSTTRGSIDF LKAQLSK