| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6496 |
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| Symbol | |
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| ID | 6182414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1118465 |
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| End bp | 1123522 |
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| Gene Length | 5058 bp |
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| Protein Length | 1685 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689615 |
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| Product | ATPase domain-containing protein |
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| Protein accession | YP_001816474 |
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| Protein GI | 172065762 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.53789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAC TTTCGACACG CCGCTTTATT GAATTGAGCC CCGGCTCGCC ACGGCTGCAC
CGCGCGATCG ACGACCATGC GCCGCCGGTT CTGATCGCCG GGCGCGGCGC GGCGGCGCCG
TCCGCGGTCG CGGCGCTGCA ACGCGAATAT GTATTGCGCT CGGCACTGCA CGAACGCTGG
TCAGCCGTGC CGCAAGCCAT CGTGTCGCAC GGTGGCGGCG CCGTACTCAT CCTGGCCGAT
CCGGGCGGCA TGCCGCTCTC CGTTGAAGCT ATCCCGCAGC AGCGTGTGTC CGCGTTTCTG
CGGCGCGCGA TTGCGCTCGC GACCGCGCTG GGCGAGATGC ATGCGGCCGG TATCGTGCAT
CGCGCGCTTG CGCCGCATCG CTTCCTCGTG GATGACGACG ATCGTGCGTT CGTGACGGGC
TTCGGCTATG CGATCGGCCC CGATGCAGCC GACCCGTTGC GCGACACCGC TCTCGAGTGG
GACGACACGG ATTTCGTCTA TACGGCGCCC GAGCTCGGCA CGCGCATGAA CCTGCGTGTC
GACGCGCGCG CCGATCTTTA TTCGCTCGGC TGCATTCTCT ATGAGCAGTT GACCGGCGTG
CCGCCGTTCG ATGCGCCCGA TGCGGCCGGG CTCGTGCACG CGCATGCCAC GCATTCGGCG
CGCGCCCCTC ACGAACTCGT TCCGCATGTA CCCGAGCAGA TCTCGCGGAT CGTCGTGAAG
TTGCTCGAAA AGGCGCCGGA GCAGCGTTAC CGCACGGCCG CGGGGCTCGT CGCCGACTTG
CAGCGATGCG AGCAGTGCCT GCGTCGCGAC GGTCGCATTC CGATGTTCGC GCTCGATGTT
CATGCGGCGC TGCAGCGCCT TCAGCACGCC GATCACGTGG TGGGTCGCGA ACCGGAGATC
GACGCGCTGC GCGCGCAGTA CCGTGCCGTC GCCGCCGGTG GCGAGATGCG CGTCGCATGG
GTTTCCGGCT ACTCGGGCAT CGGCAAGTCG ACGCTGCTGC TGGAGGCCGT CGCGCGCATC
AGGCAGGACG GCGCGCTGCT CGTGGCCACC AGCAAGGGCG AGGAAGGGCG CCGCGGCACG
CCGTATGCGA TGCTTGCCGA GGCGCTGGCG CCGCTGCTGC AATTCGTGCT GGGTTGCGCG
GACGACGAAT TCGACAGGTG GCGCGCGCAA ATCGGAACGG CCGTCGCGCC CGTCGGACGC
ACGCTCGCGA GATTCCTGCC GGCGCTCTCG GCGGTGCTGG GCCCGCAAGC GGGGCCGCCG
GAGCAATCCG AACTGGCGCC CGGGCTGGAG CGCGAGCGCG TGCTGCAAGC GATCGCCCGG
CTGATCGCGT GTTTCGCGGC GCCGGAGCGT CCGCTCGCGC TGCTGCTCGA CGATCTGCAA
TGGGCCGATG CGGGCACGAT CCAGGTGCTG GAGCGGCTGG TGCAGCAACA CAGCGACACG
GCGTTGCTGC TCGTCGGCGC CTATCGCGGC AACGAGATCG ATGCGTGTCA CCCGTTGCGG
GCCGGCCCGC TGGCCGACGT TGCCGATGCA TTGACGGTGG AACTCGGGCC GCTGAACGAG
CGCGCGACGA CCGAGCTGAT CGCCCACGCG CTGCATCAGG ACACCGATGC GCTTCGCCCG
TTGTCCGACC TGATCGGGCA GAGAACCGGC CGCAATCCGT TCTTCGTGCA TCATCTGCTG
CGCCTGCTGG CCGACGAAGG CATGCTCGAT TACGATGCAG GAGCCGGCCT GTGGCGGTGG
AACATGGCAC GCATTGCCGC GCATCGCGGA GGCGATGACG TCGCGATGAT GCTGGCGCGG
CAATTCGAGC TGCTGCCGGA CGCCGCGCGA TTCATGTTGC GACTGCTGGC CTGCATCGGC
CAGCGTGCGC CGACGCGCCT GCTGGCCACG GCGGCGGGCC TCAGCGAGCC CGAGGCGATC
GACGGGCTGC AGGCGGCGCT CGATGCCGGC AGTGTCCAGC GCGACGGCGA CGACTGGACG
TTCTGGCACG ATCGCATTCG CGAGGCCGCG TATGCGTCGA TCCCGGAGGA CGAGCGCGCG
CCGCTGCATC ATGCAATCGC GTGCCGTTTG CTGACGGCCG GCGACGCCTG CGCCGACACG
TTCGTGCTGG CCGCGCAGGC GAACCTCGCC GGCGCGGTGG TCGCGACACC CGCGCAGCGC
CGCGCGTTCG CGCGCGTGAA CCTGGAGGCC GGACGGCAAG CCCGGGCCGC CACCGCGCAT
CATTCCGCGC TCGGCTTCTT TCGCGCGGCC GTCGATTTCC TCGGCGAACG GGACACCAGC
GACGACGGGC TCGACGCGCG CATGCTGTGC GGCGAGGCCG AATTCATGAC CGGTGCGCTC
GAAGCGGCCG AAGCGCGCCT CGCCGAACTG GAGCGCGTAG CCGGCGACGG CACGTTCGGC
GCGGATCTCA CGCGCCTGCG CGCGGCGTTG TACACGGCGC TGGGCCGCTT CGATCTCGCG
CTCGGTGTCG GCCTTGCGTT CCTGAAGCGC GCCGGCATCG ATATCCCGCC CCATCCGGAC
AGCGCGGACG TGCATCGCGA ATACCTGCGC CTGCGCGGCT GGCTGGATCG CAACGGGATC
GACGCGCTGC GCGACCTGCC GATCATCGCC GATCCGCTGC AGCGCGCGAT CGTCGACATC
TTTGCCGACC TGATCCCGCC GGCACTCTAT TCCGACCAGG ACCTGGTCGA CATGATTCTG
CTGCGCGCGG TGAATCTGGC GATCGAGCAC GGCCATTCCG ATGCATCGGC CAACGTCTAC
GTCTGCATGA ACCAGATCTT CGGCGTACGT TACGGCGATT ACGCCGCGTC GCTGGCATTC
GGCGAGCTCG CGCTGCATCT GGTCGACGAG CGCGGGCTCG ATCGCTATCG CGGCCGCGTA
TACATGGCGC ACGGCACGAT CGTGGTGCCG TGGGTGTTGC CGGCGCGCTC GGCCCGCGCG
TATATCTTGC GGGCATTCGA GATCACGGTC GAGTGCTGCG ACCATACGTT CGCGCTCTAT
TGCAAGCGCA ACGAGGCGAC CGGCATGCTG TTCGCCGGCG AATTTCTCGG CGACGTGCGC
GATACGGTGA CGCACGGGCT TGCGATCGCG CGCGATGCGA ATTTCCAGCT CGTGATCGAT
GCGCTGCTCG CGCAGCAGAT GCTGCTGAAG CGATTGCAGG AAGGCGAGAG TGACGATCGC
GACCTGTTGG CCCCGCCTGA GGGCCGGCCG CCGACCCTGG TCGATCTCGC GTATTGGGTC
TACCGGCTGC AGGCCGCACT GTTGTTCGGC GATCTTCCGG ACGCGCTTGA CGCGCTTCGG
CACGCCGAAG CTTGCGAGCA TGCGGCGCGT TCATTTGCCG AGCGGGCCGA TCTGCCGTTC
TATGGCGCGC TCGCACTGCT GGCGCTGCCC GGCCGCGATG CGTCCGACGA GGCTGCGCTG
CGGCGCCATG TCGAGCAGCT CGACGTCTGG GCGCGGGCGT GCCCCGAGAA CTTCGTCGCG
CGACGCGAGC TGGTGCGCGC GGAGTATGCA CGCGTGAACG GACAGCCGCT GGACGCGGCG
GAAGCCTATG CGCGCGCCGT GATGCACGCG GGCAGGCATG GCTTTACGCA GGTCGAGGCG
CTGGCCGCCG AGTATGCGGC GCGATTCCAT GCGGGTCGCG ACGCTATTGC CGCGCACGCG
TATTTGCGCC ACGCGCTGAG CGCATGGCAG CGTTGGGGAG CGCTCGCGAA GGTGCGCGAG
TTGCAGGCCG CGCATCCCGA TGTATTCGAT GCCGGAGCCG GCAATCCGGT CGGGAGCCGG
ATGCACGCAC TGGACGTGAA CGCGGTGCTG CGCGTGTCGA ACGCGCTGGC GAGCGACATC
GTGCCGGCGC GTCTCGTGGA AACGCTGTTG CGCACGACGC TCGAAAGCGC CGGGGCCGAG
CATGGCGCGC TCGCGGTGCT GCGCGAGGGC GTCTGGCATG TACCGGCGCG CGCGGACGTG
ATCGACGGCA CGATCGTCGT GACGCAGGAG GCCGTGTCGT TGACGGCGAG CGTGCTACCC
GTCTCGGTCC TGCAGGCGGT CGCGCGGACG CAGGAAGGGG TGGTGATCGA CGATGCATCG
GAGTCGCCGG TTCACGGGCA GGATGCCTAC GTTCGCCGTC GGCGCCCGCG TTCGGTGATG
TGCGTGCCGC TGATGCGTTA TGCGACGCTC GTCGGCGTGC TGTATATGGA AAACAATCTG
GCGGCGCGGA TGTTTACCGC GGCCAAGGCG GCGCTGATGG AGGTGATCGC GTCGCAGGCC
GCTTTCGCGC TCGAGAATGC GCGGCTCTAT GAGGAACTGG TCGAGCAGAA CCGTCAGCGC
GCGCATGCCG AGGAACAGTT GCGTGCCGCA CTGGCCGGCC TCGAGCGCGC CAGCCGGCTG
ACCGCGATGG GCGAGCTCGT CGCGTCGATC GTCCACGAGA TCGGACAGCC GATCGCCGCC
GTCGACACGT CGGCGAGCGC CGGGTTGCGC TGGCTGAACC GGGAACCGCC GGACCTCGGC
GAAGCGCGGG CAATGCTCGA GCACATCAAC CGGAGCGCGG CGCGGGCCAA GAGCATCATC
CAGGCGCTGC GCGCGAAGGC ACGCAAGGCT GCGCCGCAGT TTGCGACGGT CGACCTCGCC
GAGGCCGTGC GCGAGGCCGC GGCGCTCGTC GCGCGGCAAC TCGACACGCT GGACGTGGTG
CTGGAGCTGC GCAGTCATGA AGGTCCCGTC TACGTATACG GCGACCGGAT CCAGCTCCAG
CAGGTCGTGA TCAACCTGCT GACGAACGGC GCCGAATCGA TGGCCGAACT CGAGACGGCG
CGTCGTCTTT TGCTTGCGTG CGAAACGCAT GGCGTTGACA GTGTGTGCGT GAGCGTGGAG
GATTCGGGCA GCGGCATTGC ACCCGACATC GCGGACCGGC TGCTCGAACC GCTTTTCACG
ACCAAGGAGA ACGGGATGGG CATGGGCCTC GCCATTTCGC ATTCGATCGT GGACGCTCAC
GGCGGCACGT TGACGTTGTC GCCGCGCGAG GGTGCCGGTA CGCGCGCAAC CGTGATGCTG
CCGCGCGTCG ATCCATGA
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| Protein sequence | MIELSTRRFI ELSPGSPRLH RAIDDHAPPV LIAGRGAAAP SAVAALQREY VLRSALHERW
SAVPQAIVSH GGGAVLILAD PGGMPLSVEA IPQQRVSAFL RRAIALATAL GEMHAAGIVH
RALAPHRFLV DDDDRAFVTG FGYAIGPDAA DPLRDTALEW DDTDFVYTAP ELGTRMNLRV
DARADLYSLG CILYEQLTGV PPFDAPDAAG LVHAHATHSA RAPHELVPHV PEQISRIVVK
LLEKAPEQRY RTAAGLVADL QRCEQCLRRD GRIPMFALDV HAALQRLQHA DHVVGREPEI
DALRAQYRAV AAGGEMRVAW VSGYSGIGKS TLLLEAVARI RQDGALLVAT SKGEEGRRGT
PYAMLAEALA PLLQFVLGCA DDEFDRWRAQ IGTAVAPVGR TLARFLPALS AVLGPQAGPP
EQSELAPGLE RERVLQAIAR LIACFAAPER PLALLLDDLQ WADAGTIQVL ERLVQQHSDT
ALLLVGAYRG NEIDACHPLR AGPLADVADA LTVELGPLNE RATTELIAHA LHQDTDALRP
LSDLIGQRTG RNPFFVHHLL RLLADEGMLD YDAGAGLWRW NMARIAAHRG GDDVAMMLAR
QFELLPDAAR FMLRLLACIG QRAPTRLLAT AAGLSEPEAI DGLQAALDAG SVQRDGDDWT
FWHDRIREAA YASIPEDERA PLHHAIACRL LTAGDACADT FVLAAQANLA GAVVATPAQR
RAFARVNLEA GRQARAATAH HSALGFFRAA VDFLGERDTS DDGLDARMLC GEAEFMTGAL
EAAEARLAEL ERVAGDGTFG ADLTRLRAAL YTALGRFDLA LGVGLAFLKR AGIDIPPHPD
SADVHREYLR LRGWLDRNGI DALRDLPIIA DPLQRAIVDI FADLIPPALY SDQDLVDMIL
LRAVNLAIEH GHSDASANVY VCMNQIFGVR YGDYAASLAF GELALHLVDE RGLDRYRGRV
YMAHGTIVVP WVLPARSARA YILRAFEITV ECCDHTFALY CKRNEATGML FAGEFLGDVR
DTVTHGLAIA RDANFQLVID ALLAQQMLLK RLQEGESDDR DLLAPPEGRP PTLVDLAYWV
YRLQAALLFG DLPDALDALR HAEACEHAAR SFAERADLPF YGALALLALP GRDASDEAAL
RRHVEQLDVW ARACPENFVA RRELVRAEYA RVNGQPLDAA EAYARAVMHA GRHGFTQVEA
LAAEYAARFH AGRDAIAAHA YLRHALSAWQ RWGALAKVRE LQAAHPDVFD AGAGNPVGSR
MHALDVNAVL RVSNALASDI VPARLVETLL RTTLESAGAE HGALAVLREG VWHVPARADV
IDGTIVVTQE AVSLTASVLP VSVLQAVART QEGVVIDDAS ESPVHGQDAY VRRRRPRSVM
CVPLMRYATL VGVLYMENNL AARMFTAAKA ALMEVIASQA AFALENARLY EELVEQNRQR
AHAEEQLRAA LAGLERASRL TAMGELVASI VHEIGQPIAA VDTSASAGLR WLNREPPDLG
EARAMLEHIN RSAARAKSII QALRAKARKA APQFATVDLA EAVREAAALV ARQLDTLDVV
LELRSHEGPV YVYGDRIQLQ QVVINLLTNG AESMAELETA RRLLLACETH GVDSVCVSVE
DSGSGIAPDI ADRLLEPLFT TKENGMGMGL AISHSIVDAH GGTLTLSPRE GAGTRATVML
PRVDP
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