| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6495 |
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| Symbol | |
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| ID | 6182413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1117688 |
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| End bp | 1118332 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641689614 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001816473 |
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| Protein GI | 172065761 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.653682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACG CGACACCTGA TCGCAACAGC CGCACCGTCT ACGTCGTCGA TGACGACGAA
TTCGTGCGTG CCGCGCTGAT CAGCCTGCTG CGATCGATCG ACCTGGAGGT TCGCGCCTTT
GCGTCGACGG AAGAGTTTCT CGCGGCACCG AAGGGCGCGG GGCCGTCATG CCTCGTGCTG
GACGTGCGGC TGCGCGGGCA GAGCGGCATC GCGTTTCAGA CGTCGCTGGC GGAGAGCGGC
GGCCCGCAGA TGCCGATCAT CTTCATCACC GCGCACGGCG ATATCGCGAT GACGGTGAAG
GCAATGAAAG CCGGCGCGAT GGATTTCCTG ACGAAACCTT TCCGCGATCA GGACATGATC
GATGCGGTGA TCGCGGCGCT CGAGCGCGAT GCGAAACGGC TGCAGGACGA TCACTCGCTG
CTCGACCTGC GCGCGTGTTG GGAATCGCTC ACACCGCGCG AATGCGAGGT GCTGCAACAC
GTCGCGACGG GCCTGATGAA CAAGCAGGTC GCGGGCAACA TGGGCATCGC CGAGATCACG
GCCAAGATTC ATCGCAGCCA GGCGATGCGA AAAATGAAGT GCCGCTCGGT GGCCGAACTC
GTGCGCAAGA TGACCGCACT CGGCATCAAC GTGCCGTCGC GCTAG
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| Protein sequence | MPHATPDRNS RTVYVVDDDE FVRAALISLL RSIDLEVRAF ASTEEFLAAP KGAGPSCLVL
DVRLRGQSGI AFQTSLAESG GPQMPIIFIT AHGDIAMTVK AMKAGAMDFL TKPFRDQDMI
DAVIAALERD AKRLQDDHSL LDLRACWESL TPRECEVLQH VATGLMNKQV AGNMGIAEIT
AKIHRSQAMR KMKCRSVAEL VRKMTALGIN VPSR
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