| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6493 |
|---|
| Symbol | |
|---|
| ID | 6182411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | - |
|---|
| Start bp | 1115814 |
|---|
| End bp | 1116941 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641689612 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001816471 |
|---|
| Protein GI | 172065759 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACA TTCCTACCTT ATCGTCCGGA GCCTGGTTTG ACGCTCGGCT CACGCGCTCC
ATACGCAACT TCAGCCGCAC TTGCCGCGAG CATGCACGCG GTTTCGTCGC GTGTCCGGCC
CGGCTGTTCG TCGTCGCGGG CGTGCTGTTC GTCGCGGCGG CGCTGTACGA CGCTCGCGAC
CTGCTCGCGC ATGCATTGCT TCCCGCCGTC GACCGCGATC TTCTGATGGC GAGCGCGACG
TGCGCGCTGC TCGCGCTGGT GGCGGCGGTG CTGTGGCTGC GTGCGCTGCG ACTGGACGCG
GCAATCCGGC AACTCGCCGC GGCGCTCGAG GACCATGGAC TGGAAGAGCT GCCTCGTTCG
CTGGTCGAGC ACGGCACGCC GTCGATCGCG CGACTGGCCG CCGCGATCAA CGGCGCGCAT
CACCAGCATG CGGATCGCGT GACGGAACTG CTGCATGTGC TCGCCGCCTA TGCGCATGAT
CTGCGCACGC CGCTGACGCG CGTGATGCTG CGTAGCGGCA TGCTGGAAGA TCGCACGGTG
CGCGATGCGA TGGAGCGCGA CCTTGCCGAG ATGGGCGAAC TGATCAACGC GAGCCTTGCC
TGCGCACGGC TTCAGTGCAG CGTGGCGGAG CCGCCGCGCA GTGTCGATGT GGACGAGTTA
CTCGGCTCGC TCGTCGACAA CTATCGCGAC GCGGGGCTTG CCGTCGCGTT GGACGGGCGG
CTGGACTGTC CGCTCGTGAC GTTTCCGCAT GCGCTGCGGC GCGTGCTCGT CAACCTGATC
GACAACGCAC TGCGTTACGG GCGCGATGTC CGCCTGTGCG TTCGCGTCGA TGCGCGACGC
GTGATGCTTG CGGTGGTGGA TTCCGGGCCG GGCATCGTGC CGGCGGAGAT GGAAGCGGTG
TTCACGCCGT GGTATCGGGC ACCGCAGACG GCGGCGCGTG CGCCGGGGTC CGGTTTGGGG
CTCGCGATCG CACGGCGGCT GACACAAGCG ATGCAGGGCG AGCTGCAGCT GAACAATCGC
AGCACCGGCG GCCTCGAAGC GCGCGTGACG TTGCCGCTTG CTGCTGCCGG ACACGATGTC
GCGTGCGAGC CGGCACGCGC CTGTCGTTGC GGACGCTATC TGTCCTGA
|
|---|
| Protein sequence | MANIPTLSSG AWFDARLTRS IRNFSRTCRE HARGFVACPA RLFVVAGVLF VAAALYDARD
LLAHALLPAV DRDLLMASAT CALLALVAAV LWLRALRLDA AIRQLAAALE DHGLEELPRS
LVEHGTPSIA RLAAAINGAH HQHADRVTEL LHVLAAYAHD LRTPLTRVML RSGMLEDRTV
RDAMERDLAE MGELINASLA CARLQCSVAE PPRSVDVDEL LGSLVDNYRD AGLAVALDGR
LDCPLVTFPH ALRRVLVNLI DNALRYGRDV RLCVRVDARR VMLAVVDSGP GIVPAEMEAV
FTPWYRAPQT AARAPGSGLG LAIARRLTQA MQGELQLNNR STGGLEARVT LPLAAAGHDV
ACEPARACRC GRYLS
|
|---|
| |