| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6484 |
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| Symbol | |
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| ID | 6182402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1108318 |
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| End bp | 1108866 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689603 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001816462 |
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| Protein GI | 172065750 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.743744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCAG CCGAACTGTC CGCCATGCTC CCCGCGATGC TGCCGCGTCT CTGGACCTTC
GCGCTGCGAA TCTCCGGCGA CCGGCACGAC GCCGAGGATC TCGTACAGGG CGCGTGCGTC
CGTGCGCTCG AACGAGCGCA TCAGCTACGA CCGGGAACCG CGCCGCTCAG CTGGATGTTC
TCGATCGTGC AATCCACCTG GCTCAACGAA CTCCGCGCAC GCAGCGTGCG TCGGCGCTCG
GGCATGGACT GGGACGACGA CCTGCTCGAA ACCATCGCCG ATCCCACCGC GCCGACCCTG
GAGCAGCAGG CGCTGGATGC GCAGATCGTC AGGGCGGTGC AGCGGCTGCC CGAAGCGCAG
CGCGTGGTCA TGTTGCTGGT CGCGGTGGAA GGGCTCAGCT ATGGCGAAGC GGCCGAGGCG
CTCGGCGTAC CCATCGGGAC GATCATGAGC CGGCTTTCGC GTGCCCGCCA GACGATCGGC
GCCCTGTTCA GCGATGGAAA GGAACGACCC ATGAAGGGCG CAGCGAAGAG TGAGGATCAG
GGGGCATGA
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| Protein sequence | MTAAELSAML PAMLPRLWTF ALRISGDRHD AEDLVQGACV RALERAHQLR PGTAPLSWMF
SIVQSTWLNE LRARSVRRRS GMDWDDDLLE TIADPTAPTL EQQALDAQIV RAVQRLPEAQ
RVVMLLVAVE GLSYGEAAEA LGVPIGTIMS RLSRARQTIG ALFSDGKERP MKGAAKSEDQ
GA
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