| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6481 |
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| Symbol | |
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| ID | 6182575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1104630 |
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| End bp | 1105958 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641689600 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001816459 |
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| Protein GI | 172065747 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0229436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAT TGAACGCGTC TCAGATTCCG CTTGCGCCGC CCCGTCCGCT GACAGGCAGC
GACCACCGAA CGCTGGTGCT CGCCGCGCTG GGCGGCGCAC TAGAGTTTTA CGACTTCGTG
ATTTACGTGT TTTTCGCGAC GGTCATCGGT CAATTGTTCT TCCCGCAGTC GATTCCCGAC
TGGCTGCGCC AGGTGCAGAC GTTCGGGGTG TTCGCGGCCG GTTATCTCGC GCGCCCCCTC
GGCGGCGTGA TCATGGCGCA TTTCGGCGAT CTCGTCGGCC GCAAGCGCAT GTTCACGATG
AGCGTGATGC TGATGGCACT GCCGACGTTG ATGATGGGGT TGCTGCCGAC TTACGCATCG
ATCGGCGTCG CCGCGCCCGT GCTGCTCCTG CTGTGCCGCG TGTTGCAAGG CGCGGCCGTG
GGCGGCGAGG TGCCCGGCGC GTGGGTGTTC GTGTCCGAGC ACGTGCCGGC GCGCCATGTC
GGCTATGCAT GCGGCCTGCT GACGGGCGGC CTCACGCTCG GCATCCTGCT CGGCTCGCTG
ATCGCGGCGG GGATCAACCA GCACTACTCG CATGCCGCCA TCGGCGAGTA TGCATGGCGG
ATTCCTTTCG TGGTCGGCGG ATTGTTCGGA ATCCTATCGG CATTTCTGCG ACGCTGGCTC
CACGAGACGC CCGTGTTCAT CGACATGAAG CGCAGCCGCG CGCTGACCCG CGAGGTGCCG
TTGAAGGCGG TGCTGCGCGA TCACGGCAGG GCCGTGCTGG TTTCGATGAT GCTCACGTGG
ACGCTGACCG CCGCGATCGT CGTCGTGATC CTGATGACGC CGACGCTCGT CGCGAAGCGT
TTTCATATCG AGCCGGCACT TGCGCTGCAG GCCAATTCGG CCGCGACGCT CTGCCTGACC
ATCGGATGTA TCGTCGCCGG TACGGTGGCC GGACGCATCG GCACCGCCCG CACGATCTTC
TGCGGCTGCC TGCTGCTCGG CGCATCGTAT TTTTTCATGC TCCGGCAGCT CGCCGTCGAG
CCGTCATTGC TGCTGCCACT CTACGCGGTA TCCGGTTTCT TCGTCGGCGC GGTGGCGGCG
ATCCCGGTCG CCATGGTCAA CGCGTTTCCG CCGGTCGTGC GTTTTTCGGG GATCTCGTTC
TCGTATAACG TCGCGTATGC GCTGTTCGGC GGCCTGACGC CGGTGTTCGT GTCCGTGATG
CTCAAATCGA ACCCGCACGC GCCGGAGTTT TATGTGGGCG CGCTGTGCAT CGTCGGCGCG
CTGGCAGGCT TCGCGTTGCG CCCTGCACGG TCGTCATCCG GGATCGAGGC GGCCATTTCG
AAGCCGTGA
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| Protein sequence | MNSLNASQIP LAPPRPLTGS DHRTLVLAAL GGALEFYDFV IYVFFATVIG QLFFPQSIPD
WLRQVQTFGV FAAGYLARPL GGVIMAHFGD LVGRKRMFTM SVMLMALPTL MMGLLPTYAS
IGVAAPVLLL LCRVLQGAAV GGEVPGAWVF VSEHVPARHV GYACGLLTGG LTLGILLGSL
IAAGINQHYS HAAIGEYAWR IPFVVGGLFG ILSAFLRRWL HETPVFIDMK RSRALTREVP
LKAVLRDHGR AVLVSMMLTW TLTAAIVVVI LMTPTLVAKR FHIEPALALQ ANSAATLCLT
IGCIVAGTVA GRIGTARTIF CGCLLLGASY FFMLRQLAVE PSLLLPLYAV SGFFVGAVAA
IPVAMVNAFP PVVRFSGISF SYNVAYALFG GLTPVFVSVM LKSNPHAPEF YVGALCIVGA
LAGFALRPAR SSSGIEAAIS KP
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