| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6479 |
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| Symbol | |
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| ID | 6182573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 1102280 |
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| End bp | 1103251 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689598 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001816457 |
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| Protein GI | 172065745 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0252403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CGCCCTCCTC GCCCCGATCG CCGTCGCTGC CCGCGCGCGG GCGCCAACGC
CTGATCGCGT TGCTGCACGC GTTGGCGCCC GACGAAGGCT ACAACCTGAC CGCGCTGCCG
AGCGTGCGCA TCCTGCGTTC GAACCGTGCG CTGTCGCGCA CGCCGGTGTT GTACGACCCC
GGCATCGTGA TCGTGTGCCA GGGCCGCAAG CGCGGCTATT TCGGCGGCGA ACGCTATCTG
TACGACGAGG ATCACTATCT GGCGGTGTCG GTGCCCGTGC CGTTCAGCAT GGAAACCGAC
GCGACGGCGG AGCAGCCGCT GCTCGCGCTG TATCTGCACC TCGATTTCCC GATGACCGCC
GAGCTGGCCG CGCAGATCGA TCGCGCGGGG CTCGCGGAGC CCGTGCAGGC GCCGCGGAGC
ATGATGTCGA CGCCGATGGA CGAAGCGATG CAGGCGAGCG TGCTGCGTTT CGTCGAAGCG
ATGCATCGGC CGCTCGAAGC GGCGGTGCTC GGCCCGGGGC TGCTGCGCGA GCTGTATTTC
CGCGTGCTCA CGGGCGCGCA GGGCAGCGCG ATGAGAAACG CGCTGGCGAT GCGCGGCCAG
TTCGGCCGGA TCGGTCGTGC GCTGCGCGTG ATCCACGCCG ACTACGCGCA GGCGCTCGAC
GTGCCGCGAC TGGCCGGCGA AGCCGGGATG AGCGTGCCGA GCTTCCACAG CCACTTCAAG
GCGATCACGC AGGTGTCGCC GATGCAGTAT TTGAAGTCGA CGCGACTGCA TCAGGCACGC
CTGCTGATGG TGCGCCAGGA CCTGACCGCG GAGGCGGCCG GTTACGCAGT CGGCTATACG
AGCCCGTCGC AGTTCAGCCG GGAATTCAAG CGGCTGTTCG GGCTCACGCC CGCGCAGGAG
ACTAAGCGCA TGCGCGCGCA GTTCGCGATT CCGGCGGCGT TCGACGATGC GGTGTATGTG
TCGTCGCATT GA
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| Protein sequence | MSTAPSSPRS PSLPARGRQR LIALLHALAP DEGYNLTALP SVRILRSNRA LSRTPVLYDP
GIVIVCQGRK RGYFGGERYL YDEDHYLAVS VPVPFSMETD ATAEQPLLAL YLHLDFPMTA
ELAAQIDRAG LAEPVQAPRS MMSTPMDEAM QASVLRFVEA MHRPLEAAVL GPGLLRELYF
RVLTGAQGSA MRNALAMRGQ FGRIGRALRV IHADYAQALD VPRLAGEAGM SVPSFHSHFK
AITQVSPMQY LKSTRLHQAR LLMVRQDLTA EAAGYAVGYT SPSQFSREFK RLFGLTPAQE
TKRMRAQFAI PAAFDDAVYV SSH
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