Gene BamMC406_6469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6469 
Symbol 
ID6182563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp1090745 
End bp1092157 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content72% 
IMG OID641689588 
Producthypothetical protein 
Protein accessionYP_001816447 
Protein GI172065735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.974318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.5952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGA CACCGCTGCC CGCCCTGCTC GACGAAATCC TCCACACCGT CACGCGCCGC 
TATCAGCTGC CGCCGTTCGA CGGCGCGCCG ACGCCGGCCG ATGCCGCGAA CCCGGCGGCG
ACCCTTGCGC GCGTGATCGA GGACGCACGC CGGATGCTGG CCGACGGCCG GTCTCCCGGC
ACGGCGCTGC GGCAGCGGTT CATCGATGCG CTTGCGCACA TGATCCGCGC TGCGATGGAT
CCGCATGCCG GCGATCACGC GTTTCAGGCG TCGGTCCTGC GGCACGACGC GGCGAGCGTG
CGCGAATACG CGTCACTGCA CGCGCACGCC GAGCAGGACC GGCGCGCGCT GCACTCGGCC
GTCAACGCGA TCGCGCACCC GGCCAAGCTC GAGCGCAGCG CGCAGGCGTG GCAACGCGAC
GGGCTCGCGC GGTTGCATGC GGCCGCAACG TCCGGATCGT GGAGCGAGCT CCATGCCACG
CTGGAGCAGT TGCTCGCGCT GCCCGGCATG GCGACCGACA CCGCTTTCGA GCAGGACATC
GTGAAGTTGA AGGACGGTGC CGCGCTCGAG CGCCTGCTGC GTCTCGACGC GCTGGCATCG
GACGAGCACG TCCGCCGTTA TCGCGCACTG TGGGTCCGGC AAGGTCCGCT CGAAGGCAGC
ACGGTCGCCG TCGCGCAGGG CGTCGCGTCC CAGCAGCGCG GCGCGGCCGT CGAAGCGCTG
GCCGCGCAGG CGCTCGACGC ACTGGCCCGC CGGCTCGACG CGGTGGACCC GCAGCGCACG
TACCGCGTGG TCACGTCGAT GCGCGTGCCG TCATCGATAC CGGGCCGCCA CGACCGCGCG
AAGACCGAAT GGGATGCGAT CCTGCTCGAA CGCACGCGCG GCGACGAAGC GGCGCCCGCA
TGGAACGTGC GCTTCCTCGT CGAGGCGAAG GCGTCGGCGG ATGCCGCGAC GACCGATTTG
CCGCGACTGC TGCGCGGCCT GAAACTGCTC GCGCAGGCCG ACGCGGACAC GATCTATTCG
TTCGAGACGC ATCAGGGCAC GGTGCGCGTG CACGGCGCGT CGCTGCGCGC GTTGACGACC
GACGACGCGG CGCTGCGACG GGAAGTACTC TATTGCTGCG ATGCGTCCGC GGACGCGACG
CCGCGCCTGC TGGGCGCCGC GAGCCGGATG CAGTTGCTGT CGGCGCAGGC GAGCCTCGAA
TACGCGAGCG CGCTCGCGCG GCAGCCCGAT GCCGATCCGT CCGGCCTCGG CGTCATCTGG
CAGGCGCTGC TGACGCAGCC GCAATGGCAC GCGGTGCTGC ATCAATACCC GTCGTTGCGG
GAGGTGCGCG AACTGATGGT GGCCATCGAC GACTTGCGCG CCGCGATCGA CGACGCGGAC
GAAGGCGGCG TCGCGAGCAG CGCGTGCGCG TGA
 
Protein sequence
MSLTPLPALL DEILHTVTRR YQLPPFDGAP TPADAANPAA TLARVIEDAR RMLADGRSPG 
TALRQRFIDA LAHMIRAAMD PHAGDHAFQA SVLRHDAASV REYASLHAHA EQDRRALHSA
VNAIAHPAKL ERSAQAWQRD GLARLHAAAT SGSWSELHAT LEQLLALPGM ATDTAFEQDI
VKLKDGAALE RLLRLDALAS DEHVRRYRAL WVRQGPLEGS TVAVAQGVAS QQRGAAVEAL
AAQALDALAR RLDAVDPQRT YRVVTSMRVP SSIPGRHDRA KTEWDAILLE RTRGDEAAPA
WNVRFLVEAK ASADAATTDL PRLLRGLKLL AQADADTIYS FETHQGTVRV HGASLRALTT
DDAALRREVL YCCDASADAT PRLLGAASRM QLLSAQASLE YASALARQPD ADPSGLGVIW
QALLTQPQWH AVLHQYPSLR EVRELMVAID DLRAAIDDAD EGGVASSACA