Gene BamMC406_6457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6457 
Symbol 
ID6182801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp1075256 
End bp1076158 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content66% 
IMG OID641689576 
Producthypothetical protein 
Protein accessionYP_001816435 
Protein GI172065723 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.615277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.275244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAA CCCGATCCCC GCGATACACC CGCCGCGCGT GGCACGCGCT CGTCGCGGCG 
CTATGCGTCG GCTGGAGTGT GCTGTCGTTC GGTGCAGACG GCGCGGCGGC GCTGCTCGAC
CGCTATCACA GCCTCGGCGA GCAGTTGAAG AACAACCCGT TCCACCGCCC GCTGTACCTC
GAATCGTCCG AGGCATCCTC GACGCTGAAG GGTGATATCT ATGCGGTCGT CGACTATCCG
TTCTCCGTCG TGAACGGCAA GCTCAACGAT CCCGCGCAGG GCCCCGCCAA CTGGTGCGCG
GTGCTGATCC TGCATCTGAA CACGAAGTAT TGCCATGCAT CGACCGGCAG CAACGGCCCG
GTGCTCGACG TGAACCTCGG CCGCAAGATC GAGCAGAAGC TGTCGGATAC CTATCGCGTG
CAGTTCCGCT ACGGCGTGGC CGCCGCGACG CCCGACTATT TCCAGGTCGA CCTGACCGCC
GACAGCGGCC CGATGGGCAC GAAGGATTAT CGGATCGCGC TGGAGGCCGT GCCGATCGGC
GCATCGCGCA CGTTCCTGCA CCTCACGTAT TCGTACGGCT TCGGCACGGT CGGCCGCATG
GCGATGAAGA CCTACCTGGC GACGGCCGGC AGCGACAAGG TCGGGTTCAC GCTCGCGAGC
GGCGCGTCGG CCGCGCAGCC GCAATACATC GGCGGCGTGC GCGGATTGCT GGAGCGCAAC
ACGATGCGCT ACTACCTCGC GATCGACACG TATCTGGCCA CGCTCGACAA ACCGCTCGAG
CAGCGCCTCG CGCGCTGGTT CGACGCCACC GAGCAGTATC CGCAGCAGTT GCACGAAGTC
GAGCGGGCCG CGTATCTGCG GATGAAAGCG CAGGAGGTGC AGCGGCAGCA GGCGGCGCGA
TGA
 
Protein sequence
METTRSPRYT RRAWHALVAA LCVGWSVLSF GADGAAALLD RYHSLGEQLK NNPFHRPLYL 
ESSEASSTLK GDIYAVVDYP FSVVNGKLND PAQGPANWCA VLILHLNTKY CHASTGSNGP
VLDVNLGRKI EQKLSDTYRV QFRYGVAAAT PDYFQVDLTA DSGPMGTKDY RIALEAVPIG
ASRTFLHLTY SYGFGTVGRM AMKTYLATAG SDKVGFTLAS GASAAQPQYI GGVRGLLERN
TMRYYLAIDT YLATLDKPLE QRLARWFDAT EQYPQQLHEV ERAAYLRMKA QEVQRQQAAR