| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6456 |
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| Symbol | |
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| ID | 6182800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 1074073 |
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| End bp | 1075224 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689575 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001816434 |
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| Protein GI | 172065722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.411469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.286463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC GTAACTGGCT GGCATGGCTG GCCGTCTGCT CGATCGGCAC GGCCGCTGCG
TCCGCGCAGG CCGCGGACCC GGAACCCATC AAGATCGGCT TCGCCGGCCC GCTAACGGGT
CCGGTCGCGC GCGTCGGCAA GGATCTGCAA TACGGCGCGC AACTCGCGCT CGACGAGGAG
AACGCGAAAC ATCCGACCGT GGGCGGCAAG CCCGCGCGCT TCGTGCTCGA CGTGCAGGAC
GACCAGGCCG ACCCGCGCAT CGCGATCCAG GTCGCGCAGA AGCTCGTCGA CGACGGTGTG
GTCGGCGTGA TCGGCCACTA CAACTCGGGT TGCAGCATCC CCGCGTCGGC CGTCTACAAG
CAGGCGAACA TCGCGATGAT CACACCCGGC TCGACCAATC CTCAACTGAC GATGCAAGGC
TTCAAGAACG TGTTCCGCAC GATGGGGCAC GACGGTGTAG GCGGCGTGGT GGCCGGCCGC
TTCGCGGTCG AACAGCTGAA GGCGAAGCGG ATCGGCATCA TCGACGACCG CACCGCGTTC
GGCCAGGGGC TCGCCGACGC ATTCGAGAAA GGCGTGAAGG ACGCGCACGG CAGCGTCGTC
GGTCGCGAAT ACACGAACGA CAAGGCCGTC GATTTCCGCG GCATCCTGAC GACGATGAAG
AGCAACAACG TCGACCTGCT GTTCTTCGGC GGCCTCGACG AACAGGGTGC AATGCTCGTC
AAGCAGATGC GCTCTCTCGG CATCCGCGCG CAGCTGTTCG GCGCCGGCGC GCTCAAAAGC
AATGCGTTCC TGAAGATCGC CGGCAACGCG GGCGAAGGCA CGCAGGATCT CGAGCCGGGG
CCGGCGCTCG ACAAGCTGCC GTCCGCGATC GCGTTCGCGC AGCGCTACAA GGCGCGCTTC
AACCAGGACG TCGAGCTCTA TGCGCCGTTC GCGTACGACG CGGCGCTCGC GATGATCGCG
GCGGTCCACA AGGCCGGTTC GGTCGACCGC GCCAAGATCG TCGCGAGCCT GCCGGGGGTG
TCGGTCACCG GCGTCACCGG GAAGATCTCG TTCGACGAGC GCGGCGACCT GATCAAGCCG
CCCTACACGC TGTTCCGCGT CGAACAGGGA CAGTGGCACA GCATTCGCAC GGTCGGCGGC
GCGTCGAACT GA
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| Protein sequence | MNRRNWLAWL AVCSIGTAAA SAQAADPEPI KIGFAGPLTG PVARVGKDLQ YGAQLALDEE
NAKHPTVGGK PARFVLDVQD DQADPRIAIQ VAQKLVDDGV VGVIGHYNSG CSIPASAVYK
QANIAMITPG STNPQLTMQG FKNVFRTMGH DGVGGVVAGR FAVEQLKAKR IGIIDDRTAF
GQGLADAFEK GVKDAHGSVV GREYTNDKAV DFRGILTTMK SNNVDLLFFG GLDEQGAMLV
KQMRSLGIRA QLFGAGALKS NAFLKIAGNA GEGTQDLEPG PALDKLPSAI AFAQRYKARF
NQDVELYAPF AYDAALAMIA AVHKAGSVDR AKIVASLPGV SVTGVTGKIS FDERGDLIKP
PYTLFRVEQG QWHSIRTVGG ASN
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