| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6442 |
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| Symbol | |
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| ID | 6182789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1057070 |
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| End bp | 1058077 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689564 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001816423 |
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| Protein GI | 172065711 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.42498 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCG ATCTTCCTGT CGTGTGGGCC GCGATCATCG GCCTCGGCGT GTTCATCTAC
GTGATGCTGG ACGGCTTCGA CCTCGGCATC GGCCTGCTGT TTCCGTTCTT TGACGCGAAG
GCCGAGCGGC AGGTGATGCT CGACACCGTC GCGCCGGTGT GGGACGGCAA CGAGACCTTT
CTCGTGCTCG GCGGCGCGGG CCTGTACGGC GCGTTCCCGG TCGTCTACTC GACGCTGCTG
CCGGCGAACT ACCTGCCGCT GATCCTGATG GTGGTCGGGC TGATCTTCCG CGGCGCCGCG
TTCGAGTTGC GCGCGAAGGC GAACCGCACG CAGCACCTGT GGGATCTCGC GTTCATCGGC
GGTTCCGCGC TTGCCGCGTT CTGCCAGGGG ATCGTGCTCG GTTCGCTGCT GCAGGGCATC
CGGATCGTTG ACCACCAGTT CGCGGGCGGG CCGTTCGACT GGCTGTCGCC GTTCAGCCTG
TTCTGCGGGA TCGGCGTGCT CGTCACCTAT GCGACGCTCG GCTGCGGCTG GCTGATCCTG
AAGGTCGACG GCGAACTGCA GCGCAAGATG CGCGTGCTGA TGAAGCCGCT CGCGGGCGTG
CTGCTCGCCG TGATGGGCGT GGTCAGCCTG TGGACCGTGA TCGGGCTGCC GGCGGTCGCG
CACCGCTGGT TCGGCAGCGG CTACCTCGGC TGGTTCCTGC CGGTGCCGAT CCTCGTCGCC
GCGTGCGTGT GGGGCATCTT CCACTCGGTG AAGCGCCAGC ACGAGGCGAC GCCGTTCCTG
CTGACGCTCG CGCTCGTGTT CCTCGGCTAC ACCGGGCTCG TGATCAGCAT CTGGCCGAAC
ATCGTGCCGC CGTCACTGAC GATCTGGGAG GCGTCGTCGA GCCATTCCAG CCAGCTGTTC
GCGCTCGTCG GCACGGTGAT CGTGCTGCCG GTCATTCTCG TGTACAACGC GCTGCAGTAC
CGCGTGTTCC GCGGCAAGGT GCGCGAGGGC GACATCGGCT ATCACTGA
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| Protein sequence | MQIDLPVVWA AIIGLGVFIY VMLDGFDLGI GLLFPFFDAK AERQVMLDTV APVWDGNETF
LVLGGAGLYG AFPVVYSTLL PANYLPLILM VVGLIFRGAA FELRAKANRT QHLWDLAFIG
GSALAAFCQG IVLGSLLQGI RIVDHQFAGG PFDWLSPFSL FCGIGVLVTY ATLGCGWLIL
KVDGELQRKM RVLMKPLAGV LLAVMGVVSL WTVIGLPAVA HRWFGSGYLG WFLPVPILVA
ACVWGIFHSV KRQHEATPFL LTLALVFLGY TGLVISIWPN IVPPSLTIWE ASSSHSSQLF
ALVGTVIVLP VILVYNALQY RVFRGKVREG DIGYH
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