Gene BamMC406_6422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6422 
Symbol 
ID6182233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp1032469 
End bp1033146 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID641689545 
Producthypothetical protein 
Protein accessionYP_001816404 
Protein GI172065692 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.99012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTCT CCATCGTCGG ACGCTGCCCG GAAACGGGCC ATCTCGGGAT CGCGATCAGC 
TCGTCGAGCA TCGCGGTGGG CGCGCGCTGC CCGTGGGTGC GGGCGGGCGT CGGCGCGGTC
GCGACGCAGA ACATCACGCT GCCCGCGCTC GGCCCGCAGA TCCTCGACCT GATCGAGCAC
CAGCAGCTCG CGCCGGCCGC CGCGCTCGAC CGCGCGCTCA GCGCGAACGG CTGGAGCCAG
TACCGGCAGG TCACGGTGAT CGACGGGCAG GGGCAGACGG CGTGCTTCAC CGGCAAGGAG
GCGCTCGGCA CGCACCATGC GGTGCGGGGC GAGCAATGCG TGGCAGCCGG CAATCTGCTG
GCCGCGCCGG CCGTGATCGA AGCAATGGCG CGCGCGTTCG AGCAGGCGCA CGGGCTGCTG
GCCGATCGCC TGCTGGCCGC GATGCACGCG GCGATGGCGG CGGGCGGCGA GGCGGGGCCC
GTGCATTCGG CCGCGCTGAA GGTGGCCGGC GACGTGACCT GGCCGATCGT CGACCTGCGC
GTCGACTGGG CCGACGCCGA CCCGATCGGG CAGCTGGACA CACTGTGGCA GGCCTATCGC
CCGCAGATGC AGGATTACCA GACGCGCGCG TTGAACCCGA CTGCCGCGCC GAGCTATGGA
GTGCCCGGCG ATGAGTGA
 
Protein sequence
MTFSIVGRCP ETGHLGIAIS SSSIAVGARC PWVRAGVGAV ATQNITLPAL GPQILDLIEH 
QQLAPAAALD RALSANGWSQ YRQVTVIDGQ GQTACFTGKE ALGTHHAVRG EQCVAAGNLL
AAPAVIEAMA RAFEQAHGLL ADRLLAAMHA AMAAGGEAGP VHSAALKVAG DVTWPIVDLR
VDWADADPIG QLDTLWQAYR PQMQDYQTRA LNPTAAPSYG VPGDE