| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6420 |
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| Symbol | |
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| ID | 6182231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 1030319 |
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| End bp | 1031242 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689543 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001816402 |
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| Protein GI | 172065690 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.83075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.614202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCACT ACACTTTGCG GCAACTGAAA TATTTCGTGA CGACGGTGGA ATCCGGCAGC
GTCGCCGAGG CGTCGCGCCA GCTCTTCATC GCGCAGCCGT CGATCTCCAG CGCGATCAAG
GGGCTCGAGG AAAGCTTCGG CGTGAAGCTG TTCATCCGCC ATCACGCACA GGGCGTGTCG
CTGACGCCGA GCGGCACGCG TTTCTACCGG AAGGCGCAGG AGCTGCTGCG CATCGCGCAC
GAGTTCGAGC AGAACGCGCT CGCCGACAAC GACGTGATCA GCGGGCAGAT CGACATCGGC
TGCTTCGAGA CCGTCGCGCC GCTCTACCTG CCGCAGCTGA TCGCGGGCTT TCGCGAACGC
TATCCGGGCG TCAACATCCG GCTGCGCGAC GGCGACCAGC AGGAGCTCGT GCAAGGCCTG
ACGGCCGGCA CCTTCGATCT CGCGTTTCTC TACGACCACG ACCTCGACGG CACGATCGAG
ACCGAGCCGC TGATGCCGGC GCAGCAGCCG TACGTGCTGC TGCCGGAGAA CCACCGGTTC
GCGGGCCAGT CGCACGTATC GCTGCACGAG CTCAGCGTCG AGCCGATGAT CCTGCTCGAC
GTGCTGCCGA GCCGCACGTA TTTCGTCAGC CTGTTTCACG AGCTCGGACT CACGCCGAAC
ATCGTGTTCG CTTCGCCGTC GATCGAGATG GTGCGCGGGA TGGTCGGCCA GGGGTTCGGC
TTCTCGCTGC TCGTCACGCG GCCGCATTCC GAATACACGT ACGACGGCCG GCGCGTCGTG
ACGATCGGCC TGAGCGAAAC GGTGAGCCCG TCGGGGCTCG TGAGCGCGCG GCTGAAGCGC
GGGCAGCTCA CGAAACAGGC GCAGTCGTTC GTCGAGTTCT GCCGCGAGCG GCTGGCGCAG
ATCGTCGCGG AATCGGCGCG GTAA
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| Protein sequence | MAHYTLRQLK YFVTTVESGS VAEASRQLFI AQPSISSAIK GLEESFGVKL FIRHHAQGVS
LTPSGTRFYR KAQELLRIAH EFEQNALADN DVISGQIDIG CFETVAPLYL PQLIAGFRER
YPGVNIRLRD GDQQELVQGL TAGTFDLAFL YDHDLDGTIE TEPLMPAQQP YVLLPENHRF
AGQSHVSLHE LSVEPMILLD VLPSRTYFVS LFHELGLTPN IVFASPSIEM VRGMVGQGFG
FSLLVTRPHS EYTYDGRRVV TIGLSETVSP SGLVSARLKR GQLTKQAQSF VEFCRERLAQ
IVAESAR
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