| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6415 |
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| Symbol | |
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| ID | 6182226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 1021541 |
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| End bp | 1022356 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641689538 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_001816397 |
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| Protein GI | 172065685 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.116094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.258544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACC TGCACCGCGA ACTCGCGCCG ATCGCCTCGT CCGCGTGGGC GCAGATCGAG
GAAGAAGTCG CCCGCACCTT CAAGCGCTCG GTGGCCGGGC GCCGCGTGGT CGACGTCGAA
GGGCCGGCCG GCCCCGGGCT GTCGGCCGTC GGCACCGGGC ATCTGCGCGA CGTCACCGCG
CCGCGCGAGC AGGTGAGCGC GCGGCTGCGC GAGGTCCGCA ACGTCGTCGA GCTGACGGTG
CCGTTCGAGC TGAGCCGCGA TGCGATCGAC AGCGTCGAGC GCGGCGCGCG CGACGCCGAC
TGGCAGCCGG CGAAGGACGC CGCGCAGCGC CTGGCATTCG CGGAAGACGG CGCGATCTTC
GACGGCTATC TGGCCGCGGA CATCGTCGGC ATCCGCGAAG GCACGTCGAA CCGCAAGCTC
ACGCTGCCGA CCGACGTCAG CGCGTACCCG GACGCGATCA GCGACGCGCT GGAAGCGCTG
CGGCTCGCGG GTGTCGATGG CCCGTACACG GTCGTGCTCG GCTCGGACGC CTACACGGCG
CTCAGCGAAG CGCGCGACCA GGGCTATCCG GTGCTCGGCC ACATCAAGCG CATCGTCAGC
GGCGAGATCG TGTGGGCGCC GGCGATCAGC GGCGGTTGCG TGCTGTCCAC CCGCGGCGGC
GACTACGAGC TGCACCTCGG CGAAGATGTG TCGATCGGCT ATACGAGCCA TACCGACAAG
GTCGTCCGCC TGTACCTGCG CGAAACGTTC ACGTTCCTGA TGCTGACGAG CGAGGCATCG
GTGGCCGTGG CGCCGCAGGC CAGCACGGCG GCCTGA
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| Protein sequence | MNNLHRELAP IASSAWAQIE EEVARTFKRS VAGRRVVDVE GPAGPGLSAV GTGHLRDVTA
PREQVSARLR EVRNVVELTV PFELSRDAID SVERGARDAD WQPAKDAAQR LAFAEDGAIF
DGYLAADIVG IREGTSNRKL TLPTDVSAYP DAISDALEAL RLAGVDGPYT VVLGSDAYTA
LSEARDQGYP VLGHIKRIVS GEIVWAPAIS GGCVLSTRGG DYELHLGEDV SIGYTSHTDK
VVRLYLRETF TFLMLTSEAS VAVAPQASTA A
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