Gene BamMC406_6411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6411 
Symbol 
ID6182222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp1018869 
End bp1019324 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content68% 
IMG OID641689534 
Productmembrane protein 
Protein accessionYP_001816393 
Protein GI172065681 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.475674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.162547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC AACTGATCGT CGCCGTATTC GGCAGCGCCG AGACGGCCCG TCAGGCCGCG 
AACGATTTCG AGGCGCTGTC GGAGAAACAT GAAGGATTTC ACGTCGACAA TGGCGTCGTC
GTCGAAAAGG ATGCGAACGG CAAACTCGCC GTGCTCGACG CCGAGTCGCG GTCGTTCAAG
GGCGGCGTGA TCGGCGCGAT CGCGGGCGGC CTGCTCGGGA TGCTCGCCGG GCCGCTCGGC
GCGATCGCCG GCATGGCGGC CGGTGCGGGG GCCGGCATCG TCGCGGACGC AGCCGGCAAT
GCGCTGCTCG ACGGGCAGTT CGTCGAATCG GTCGCGACAG GGCTCGCGCC GGGCAGCGTC
GCGGTCATCG TCGAGGCGGA CGAGGCGACG CCGTTCTCGG TCGACAACAT CGTCACGGGA
TTCGGCGGGA AGGTCGTGCG CCACGTTATC GGCTAG
 
Protein sequence
MTKQLIVAVF GSAETARQAA NDFEALSEKH EGFHVDNGVV VEKDANGKLA VLDAESRSFK 
GGVIGAIAGG LLGMLAGPLG AIAGMAAGAG AGIVADAAGN ALLDGQFVES VATGLAPGSV
AVIVEADEAT PFSVDNIVTG FGGKVVRHVI G