| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6406 |
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| Symbol | |
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| ID | 6182551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 1012534 |
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| End bp | 1014120 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641689530 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001816389 |
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| Protein GI | 172065677 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0853653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.114934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG ACGACGCCAT TTCCGAATTA CCTCCGCCGC TCGGCCCCGC CGATGCACGC
GATCTGCTGC ATCGATTCGC CGAGTTCCGC TTCGAAACCG TCGTCGGTGC GATCACCGAT
TACGCGGTGT TCATGCTCGA TCCGCAAGGC AACGTCGCGA CCTGGAACGC GGGCGCGGAG
CGCATCAAGG GCTATCGCAC CACCGAGATC ATCGGCCACC ATTTCTCGCG CTTCTATCCG
CCCGACGCGA TCGCCGCGGG CCGGCCCGCG CTCGGGCTCC GCGAAGCGAG CGTGCACGGC
CGTTTCGAGG ACGAAGGCTG GCGCGTGCGC AAGGACGGTT CGCTGTTCTG GGCCAGCGTG
ACGATCACGG CCGTGCGCGA TCATGGGGGC CAGCTGGCCG GCTTCATCAA GATCACGCGC
GACATGACCG AGCGCAAGCG GCTCGCCGAA CTGGAAATGT CGACGCACCG GCTCAGCGTG
TTCATCGCGA TGCTCGCACA TGAACTGCGC AACCATCTCG CACCGCTGCG CCACTCCGTC
AGCGTGCTGC AAACGCTGCC CGATCCGGCG CCGATGCTCG CGCAATGCCG CGATGCGGTG
CACCGTCAGG TCGGACAGCT GACGCGGCTA GTCGACGATC TGCTCGACGT CGGGCGCATC
ACGGCCGGCA AGGTCGAGCT CGACAACGCG CCGGTGACGG TGCGCGACGT CGTGTGCCGC
GGCGTGGAGA GCATCCAGCC GAAACTGGCC GCGCGCCAGC AGCATCTTCG CGTCGAACTT
CCGCCAGAGC CGGTGGTGGT GCGTGGCGAC GCCGCGCGGC TCGTGCAGGT GCTGCACAAC
CTGCTCGACA ACGCGTCCAA GTTCTCGCCG CCCGGCGCGC GCATCGACGT CGCCGCCGCC
CGCGAGGGTG CGACCGTCGC GATTCGCGTG ACCGATCATG GCGTCGGCAT CGCGGCGGGG
TCGCTCGAGA CGATCTTCGA CCTGTTCGAC CAGGACGGCG TGCCGGGCCG GCGCCCGTCC
GACGGCTTCG GGCTGGGCCT CGCGATCTGC CGGTCGTTCA TCGAGCTGCA TGGCGGCAGG
ATCTCCGCGG AAAGCGAGGG CCCCGGCCAC GGTGCGACGT TCACGGTACG GTTGCCCGTC
GAGCACCACG TGGAAACGGC ACGGACGGAA GCGCCCGCGC CGCGCGCCGG GAAGCCGACC
GCCGCGCCGC TGAACATCGT CGTCGTCGAC GACAACCGCG ACTCGGCCGA CACGCTCGCC
GTGCTGCTGC AACTGAAGGG GCACGTGCCG CGCGTCGCGT ACAACGCGAG CGACGCGCTG
GCGCTCGTGC GCGAAGCCGT TCCGCATCTG ATGCTGATCG ACCTGTCGAT GCCCGACGTC
GACGGCTACA CGCTGCTGCA CGAACTGCGC GCGATCGACA CGCCGGGCGG CATGATCTTT
GTCGCGCTGT CCGGTCATGC CAGCTCATCG GATCTCGCGC GCACGGCGCG CGAGGGCTTC
GACGATCACC TCGTGAAACC CCTCGAGATG GCCGTGCTCG ACGCGCTGCT GCAGCGTGTC
GCGCGCACGG TGCATGGCAC GCCATGA
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| Protein sequence | MNKDDAISEL PPPLGPADAR DLLHRFAEFR FETVVGAITD YAVFMLDPQG NVATWNAGAE
RIKGYRTTEI IGHHFSRFYP PDAIAAGRPA LGLREASVHG RFEDEGWRVR KDGSLFWASV
TITAVRDHGG QLAGFIKITR DMTERKRLAE LEMSTHRLSV FIAMLAHELR NHLAPLRHSV
SVLQTLPDPA PMLAQCRDAV HRQVGQLTRL VDDLLDVGRI TAGKVELDNA PVTVRDVVCR
GVESIQPKLA ARQQHLRVEL PPEPVVVRGD AARLVQVLHN LLDNASKFSP PGARIDVAAA
REGATVAIRV TDHGVGIAAG SLETIFDLFD QDGVPGRRPS DGFGLGLAIC RSFIELHGGR
ISAESEGPGH GATFTVRLPV EHHVETARTE APAPRAGKPT AAPLNIVVVD DNRDSADTLA
VLLQLKGHVP RVAYNASDAL ALVREAVPHL MLIDLSMPDV DGYTLLHELR AIDTPGGMIF
VALSGHASSS DLARTAREGF DDHLVKPLEM AVLDALLQRV ARTVHGTP
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