| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6403 |
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| Symbol | |
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| ID | 6182548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 1007882 |
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| End bp | 1010692 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689527 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001816386 |
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| Protein GI | 172065674 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.452757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.164839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCG GCACCGACGA GCTGACGCGC GCCGGCCGCG ACCCGCGCGG CAACGGCGCG
CGCCCTGACC GCCACGGCGA TTCCCGCGAC AGTCGCGAGC GCGACACACG CGGGCTGCGC
ATGCGCATCG CGCTCGAGCT GTGGCGCGCG ATCCGCCATT ACCGCACGCG CGTGTTCGCC
TCGATCGTGC TGCTGGTGCT CGCGAAGGCG GCGGCCGTAT CGGTGCCGCT GCTGCTGAAG
GATATCGTCG ACGGGTTCGG CCGGGCGGCC GGCCAGCCGA TCGCGCTGCC GGTGCTGCTG
CTGTTCGCGT ATGCGGTCGT GCGCTTCGCG GCGAATGCGT TGAACGAAGT GCGCGACATG
ACCTTCGTGC AGGTCACGCA GCACACGGTC GCGTCGTTTA CCGTGCGCAC GTTCGGCCAC
CTGCACCGGC TCGGCGCGCG CTTTCATTCG CAGCGCGAGA CGGGCATGGT CGTGCGCGAT
CTCGAGAAAG GCACGGCCGG CATCGCGTAC CTGCTCGGCG TCGCGGTGTT CACGATCGTG
CCGACCGCGA TCGAGATCGG CTCGGTGCTG GTGATCGTGA TCAGCAAGTA CGGCGGCGGC
TTCACCGCGA TCATCCTCGT CACGTTCGCC GTCTACGCGG CGTACACGAC CGTGTTCACC
CGCCGGCGGA CGCGCTACCA GCGCCGCGTG AACGCGCTCG AGGCCGAATC GAACTCGCTC
GTGGTCGACA GCCTGCTCAA CGTCGATACC GTCAAGTACT TCGCGCGCGA GGATGTCGAG
CGCAGCCGGC TCGAACGCGT GCTCGACGAC TGGCGCGAGG CCGGTGTCGA GAATCAGTAC
GCGCTGTCGA CGCTGCACAT CGGGCAGAGC GCATGCATCG GCGCGGGCAT CGCGGCGGTG
ATGCTGCTCG CCGGCCAGTA TGTCGCGCGC GGCACGATGA CGGTCGGCGA CCTGGTGCTG
ATCAACGCGT ACATCATCCA GATCAGCCTG CCGCTGAACG CGCTCGGCTT CGTGTTCCGC
GAGGCGAACG ATGCGATGAC CAATATCGAA CGCCTGTTCG GGCTGCTCGA TGCGCGCGGC
CAGCCGGGCG AGGACGGCGA CGCGCCGGGC GCGCAGCCGC TCGCGGTGCG CGGCGGCGCG
ATCGAGTTCG AGCATGTCGA CTTCAGCTAC GAGCCGAGCC GGCAGATTCT GTGGGATGTA
TCGTTTCGCA TCGAGCCCGG GCAGTCGGTC GCGGTGGTCG GCGGCAGCGG CTCGGGGAAG
TCGACGCTCG CGCGGCTGCT GTTCCGGCTG TACCAGCCCG ATGCCGGCAC GATCCGGATC
GACGGCCAGG ACCTGCGGCT CGTGACCGAG CGCAGCCTGC GCGATGCGCT CGGCATCGTT
CCGCAGGACA CGATCCTGTT CAACGACACG CTGGCCTACA ACATCGCGTA CGGCAGGCGC
GACGCGACGC GCGGCGACGT GATCGCGGCC GCGCGCGGCG CGCAGCTCGA CACGTTCATC
GAACGGCTGC CCGATGCGTA CGATACGCGG GTCGGCGAGC GCGGCGTGCG GCTGTCGGGC
GGCGAGCGGC AGCGCGTCGC GATCGCGCGC GCGCTGCTGA AGGCGCCGCC GATCGTCGTG
TTCGACGAGG CGACGTCGGC GCTCGACACG CGCTCCGAAC GCGCAATCCA GCAGGAACTG
ATGCGGGTCG CGCGGCACCG CACGAGCCTC ATCATCGCGC ACCGGCTGTC GACGATCGTC
GACGTCGACC GGATCCTCGT GATGGAGCAC GGCCGGCTCG TCGAGCAGGG CACGCACGAC
GAACTGCTGG CGAGCGACGG CGTGTATGCG CAGATGTGGT CGCTGCAGGC GAAGCAGCGC
GAGCTGGAGC GCACCGAGGC GAAATTCGCG CGGCAGCCGG TGCGGATCAA TCCGCTCGTC
GCGCACGTGC TCGACTCGCT GGCGGAGGCG GCCGCCCGGC GCGGCGTGCC GGTATTTCGC
GAATTGTCGA ACGAGGATCT CGTCGTGAAG GCCGATCCGG CCGCGCTGCG CCGCTTCGTG
TGGGAGCTGT GCCGCGGCGG GATCGACGCG AGCGGCGGCG GCCAGGTCGA GGTGCGCACC
GCGCGCCACG ACCCGGAAGC GCGCATCACG ATCACCTGCG CGGGCGTCGA GGCGCCGGAG
TTGTCGCTGC TCGATCTCGA ACGGCTGCAG GACACGATCG AGGATGCCGG CGGCTACGTC
GTGCGCGAGC GCGACGACCA CGGCGTGACG TTGCACCTGT CGCTACCGAT GTGCGCGGTG
GCGCCGGCAT CGCTTCAGGC GGCCGGCACC GGCGCAACCG TGCCGACAAA ACCGCTCGCC
GGCGTGCGCA TCGCCTGCGT CGACGATCAC GACGAGGCGC GCGAGGCGCT CACCGCGCTG
CTGAAGTTTG CCGGTGCGGA CGCGCGCGCG TTCGCGTCCG GACAGGCGCT GCTCGACGAA
CTGTGGCACG CGCGCCGCGC GGACTGGCCG GCGCTGCTCG TCTGCGACAT CGACCTCGGC
GACGACGAGG AAGACGGCTA CACGGTGATG CGCCGGGTCC GCCAGCTCGA TGCCGAACGC
CCGCGCGACG GCCGTGCGCC GCTCGAGGCG CTCGCGTTGT CCGGCCATGC GCGCGAACGC
GACCGCACCC GCGCGGTCGA AGCGGGTTTC CATGCGTACC TGACCAAGCC CGCCGCGGCG
GACGACCTGA TCGCGGCGCT GCGCGCGCTC GCGTTTTCCT CCGGAGAACT CCATGCCGAA
CCTTCTGAAT CCGACGTCCC CCGAAACCCT GACCCAGCGC CGCGGCGGTA G
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| Protein sequence | MTAGTDELTR AGRDPRGNGA RPDRHGDSRD SRERDTRGLR MRIALELWRA IRHYRTRVFA
SIVLLVLAKA AAVSVPLLLK DIVDGFGRAA GQPIALPVLL LFAYAVVRFA ANALNEVRDM
TFVQVTQHTV ASFTVRTFGH LHRLGARFHS QRETGMVVRD LEKGTAGIAY LLGVAVFTIV
PTAIEIGSVL VIVISKYGGG FTAIILVTFA VYAAYTTVFT RRRTRYQRRV NALEAESNSL
VVDSLLNVDT VKYFAREDVE RSRLERVLDD WREAGVENQY ALSTLHIGQS ACIGAGIAAV
MLLAGQYVAR GTMTVGDLVL INAYIIQISL PLNALGFVFR EANDAMTNIE RLFGLLDARG
QPGEDGDAPG AQPLAVRGGA IEFEHVDFSY EPSRQILWDV SFRIEPGQSV AVVGGSGSGK
STLARLLFRL YQPDAGTIRI DGQDLRLVTE RSLRDALGIV PQDTILFNDT LAYNIAYGRR
DATRGDVIAA ARGAQLDTFI ERLPDAYDTR VGERGVRLSG GERQRVAIAR ALLKAPPIVV
FDEATSALDT RSERAIQQEL MRVARHRTSL IIAHRLSTIV DVDRILVMEH GRLVEQGTHD
ELLASDGVYA QMWSLQAKQR ELERTEAKFA RQPVRINPLV AHVLDSLAEA AARRGVPVFR
ELSNEDLVVK ADPAALRRFV WELCRGGIDA SGGGQVEVRT ARHDPEARIT ITCAGVEAPE
LSLLDLERLQ DTIEDAGGYV VRERDDHGVT LHLSLPMCAV APASLQAAGT GATVPTKPLA
GVRIACVDDH DEAREALTAL LKFAGADARA FASGQALLDE LWHARRADWP ALLVCDIDLG
DDEEDGYTVM RRVRQLDAER PRDGRAPLEA LALSGHARER DRTRAVEAGF HAYLTKPAAA
DDLIAALRAL AFSSGELHAE PSESDVPRNP DPAPRR
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