| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6394 |
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| Symbol | |
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| ID | 6182539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 998796 |
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| End bp | 999866 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689518 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001816377 |
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| Protein GI | 172065665 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.439946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.133282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAT CCGACGATGA CGGCACGCGG CTGTTCGGCC GTTCGCGCAC CATCCAGGAC
TTGCTGCTGA AAATTTCGCG CGTCGCCGCG ACGCGCGTGA GTGTGCTCGT GGTCGGCGAA
AGCGGTGCCG GCAAGGACAT CGTCGCGCGG CTGATCCACG ACATGAGCCC GCGCCGGCGC
GGCCCGTTCG TGCCCGTCAA CTGCGGGGCG ATTCCGAAAG ACATCGCGGA GTCCCATTTG
TTCGGACATG AAAAAGGCAG CTTCACCGGC GCCGTCGCGC AACATGTGGG CATGTTCGAA
GCCGCGCGCG GCGGCACGCT GTTTCTCGAC GAAATCGCGG AAATGCCCGC GGAATTGCAG
GTGAAACTGC TGCGCACGCT CGAATCGAAC ACGATCGTGC GGGTCGGCGG CCACGAAGCG
ATTCCGCTCG ACGTGCGGAT CGTCGCGGCC ACCCATCACG ATCCGGTCGA GGCCGTGCGC
AGCGGCCGGC TGCGCGAGGA CCTGTTCTAC CGGATCGCGA CGATCGCGCT GCACGTGCCC
GCGCTGCGGC AGCGCGAGGA CGACGTCGGC GACATCGCGC TGCAGATCGT CGAGCGGCTG
AACGCGCGGC ACCGCACGCG CAAGCGCCTG TCGATGCAGG CGATGAAGGC GCTGCGCGCG
TACACGTGGC CCGGCAACGT GCGCGAGTTG CGCAACGCGC TGGAGCGTGC GTTCATCCTC
GCGGACGACC AGATCGAACT GCAGCTGCCG CGCCGGCTGC CGCCGCGCGA GGAAGTGCGT
CACAACGCGA TGACGCTGCA TATCGGCACG ACACTCGCGC ATACGCAGCA GCGCTTCATC
GTCGCGTCGC TGCGTCATTT CAACGGCGAC AAGCCGCGCA CCGCGAAGGC GCTCGGCATC
AGCCTGAAGA CGCTGTACAA CCGCCTCGCG CTGCTGCCCG AACACGAGCG CAACGCGACG
AACGGCACCG CCGCGTCGAC GTCGGGCGCG AGTAGCTCGA ACGGCACCAG CGGCAGCAGC
ACCAGCAACG CCGCGAGCGC GGCCACGCCG GCGAGCCCGT CGAACGCATA G
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| Protein sequence | MSKSDDDGTR LFGRSRTIQD LLLKISRVAA TRVSVLVVGE SGAGKDIVAR LIHDMSPRRR
GPFVPVNCGA IPKDIAESHL FGHEKGSFTG AVAQHVGMFE AARGGTLFLD EIAEMPAELQ
VKLLRTLESN TIVRVGGHEA IPLDVRIVAA THHDPVEAVR SGRLREDLFY RIATIALHVP
ALRQREDDVG DIALQIVERL NARHRTRKRL SMQAMKALRA YTWPGNVREL RNALERAFIL
ADDQIELQLP RRLPPREEVR HNAMTLHIGT TLAHTQQRFI VASLRHFNGD KPRTAKALGI
SLKTLYNRLA LLPEHERNAT NGTAASTSGA SSSNGTSGSS TSNAASAATP ASPSNA
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