| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6393 |
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| Symbol | |
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| ID | 6182538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 997082 |
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| End bp | 998449 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689517 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001816376 |
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| Protein GI | 172065664 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.106085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTATG TCCTGATTGT CGAAGACGAC GCCGATACGC GCGCGATGCT TGCGGCACTT
GCGCAGTCGC AGCAGCTTGC ATGCGACACG GCCGCGACGC TCGAAGAAGC GCGCACGCTC
GTCTCGACGA ATACCCCCGA TCTGGTGCTT TGCGACCTCG TGCTGCCGGA CGGCAACGGA
ATGGATCTGT TCGACGCATT ACCCAAGCGC GGGCATTGCG AAATGGTGCT GACCACCGGT
CACGCGAGCC TCGAAACCGC GATCGACGCA TTGCGGCGCG GCGCGTCCGA CTACCTGGTG
AAGCCGCTCA ACATGCAGCG GCTGAACAGC ATCTTCGCGC GCGTGCCGCG CACCACCGCG
CTGCATGAGG AAATCGCCGA GCTGCGCTCC GAGCTGCAAC GCCTCGGCCG CTTCGGCCGG
ATGCTCGGCA GCTCGCCCGC GATGCAGGCT GTCTACGACG CGATCGGCCG CGTCGCGCGT
ACCGAAGCGT CGGTGCTGCT CACCGGCGAA TCGGGCACCG GCAAGGAGCT CGCCGCGCAA
ACCGTGCACG ACCTGAGCCT GCGCCGCCGT GGCCCGTTCC TCGCGGTGAA CTGCGGCGCG
ATCGCCGCGA ACCTCGTCGA AAGCGAAATG TTCGGCCACG ACCGCGGCAG CTTCACCGGC
GCGGAACGGC AGCACAAGGG CTTCTTCGAG CGCGCGGACG GCGGCACGCT GTTCCTCGAC
GAAATCACCG AGATGCCGGT CGAATCGCAG GTCAAGCTGC TGCGCGTGCT CGAAACCGGG
CGGCTCACGC GGCTCGGCTC GACGCGCGAG ATCGACGTCG ACGTGCGCAT CGTCGCCGCG
ACCAACCGCG ATCCGGAAGC CGCGATGGCG GACGGCAAGC TGCGGCCCGA CCTGTATCAC
CGGATCAACG TGTTTCCGAT CCCGCTGCCG TCGCTCAGGG AGCGCGGCGA CGACATCCCG
ATGCTCGCCG ACGCGTTCCT GCAACGCTAC AACGAGGAAA GCGGCCGCAA CCTGCGCTTC
GCGCCGGCCG CGCGCGAAGC ATTGAAGTCG TACGCATGGC CCGGCAACGT GCGCGAGCTG
CGCAACTTCG TGCAGCGCGC GAGCATCTTC AGCGACGCCG ACGTGATCGA CACGCTGCCG
CCGCCGATCA TGGACGAACT GTCGAGCATG GTCGAGTCGC ACGAAGATCG CGTGACGGTG
CCGTTCGGCA CGCCGCTCGA GGAGGTCGAC CGCAAGCTGA TCCTCGGCAC GATCGCGCAA
TGCGGCGGCG TGAAGGCGCA GGCGGCCGAA GTGCTCGACG TCAGCCTGAA AACGATTTAC
AACCGGCTCG CGCAGCTGGA AGACGAAACG GAAAAGCCGG ACTCCTGA
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| Protein sequence | MPYVLIVEDD ADTRAMLAAL AQSQQLACDT AATLEEARTL VSTNTPDLVL CDLVLPDGNG
MDLFDALPKR GHCEMVLTTG HASLETAIDA LRRGASDYLV KPLNMQRLNS IFARVPRTTA
LHEEIAELRS ELQRLGRFGR MLGSSPAMQA VYDAIGRVAR TEASVLLTGE SGTGKELAAQ
TVHDLSLRRR GPFLAVNCGA IAANLVESEM FGHDRGSFTG AERQHKGFFE RADGGTLFLD
EITEMPVESQ VKLLRVLETG RLTRLGSTRE IDVDVRIVAA TNRDPEAAMA DGKLRPDLYH
RINVFPIPLP SLRERGDDIP MLADAFLQRY NEESGRNLRF APAAREALKS YAWPGNVREL
RNFVQRASIF SDADVIDTLP PPIMDELSSM VESHEDRVTV PFGTPLEEVD RKLILGTIAQ
CGGVKAQAAE VLDVSLKTIY NRLAQLEDET EKPDS
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