| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6388 |
|---|
| Symbol | |
|---|
| ID | 6182533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010557 |
|---|
| Strand | + |
|---|
| Start bp | 990571 |
|---|
| End bp | 991887 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641689512 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001816371 |
|---|
| Protein GI | 172065659 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.570684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.371052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGAA TTGCGTTGAT CAGTGAACAT GCGTCGCCGC TGGGAGTGAT CGGCGGCGTG
GATGCGGGCG GACAGAACAT CTACGTCGCG AACGTCGCGA AGCAACTGGC CGAGCGCGGC
CTCGACGTCG ATGTCTACAC GCGTTGCGAC AATGCGCACC TGCCGGAAGT CGTGGAGATC
GGCCCGCGCA TGCGCGTGAT TCACGTGCCG GCCGGCCCGC CGGTCGACGT GCCGAAGGAG
CGGCTGCTGC CGTACATGGG TGCATTCGCC GACTACATGA TCGCGCGCAT GCGGCGCGAG
GCCGATCCAG TCGACGTGAT GCACGCGAAC TTCTTCATGT CGGGCGACGC CGCGCTGCGC
GTGAAGAAGC GCCTCGGCAT TCCGCTCGTC ACGACGTTCC ATGCGCTCGG GCGCGTGCGG
CGGCTGCATC AGGGCGCGGC CGACGGCTTT CCCGATGAAC GCTTCGCGAT CGAGGACACG
CTCGCGCGCC GCTCGGACCG GTTGATCGCC GAATGCCCGC AGGACGCGCT CGACCTGACC
ACGCACTATC ACGCGGACGC CGCGCGCATC GACATCGTGC CGTGCGGGTT CGATGCGCGC
GAATTCCGGC CGGTGCCGCG CGCCGACGCG CGCGCGCAGC TCGGCTGGCC GCAGCACGCA
TTCGTCGTGC TGCAGCTCGG GCGGCTCGTG CCGCGCAAGG GGATCGACAC CGTGATCGAC
GCGCTTGCGC GAATGCCACG CGACCCGCAG CGGCCGACGC GGCTCTATAT CGTCGGCGGC
AGCCACGCGA CGCCCGATCC GGCCCGCGAT CCGGAACTCG CGCGGCTCGC CGCGCTCGCG
CACGACACCG GCATCGCGGA ACGCGTGATC TTCGTCGGCC GGCGCGAGCG CGACGTGCTG
CACCTGTACT ACAGCGCGGC CGACGTGTTC GTGACGACGC CGTGGTACGA GCCATTCGGC
ATCACGCCGG TCGAGGCGAT GGCCTGCGCG GCGCCGGTGA TCGGCAGCGA CGTCGGCGGC
ATCCGCACCA CGGTCGACGA CGGCGTGACC GGCTACCTGG TGCCGCCGCG CGATCCGGCT
GCGCTCGCCC AGCGGCTCGT GCAGCTGCGC GCGCGCCCTG ACCTGTGCGA CGCGCTCGGC
CGCGCCGGCT ACCTGCGCGC GCACCGCTTC TATACGTGGC GCGGCGTGGC CGATCGCCTC
GTCGACATCT ACCGCGACGT CGCGCATCCG CAGCGCGCCG GCACGGCGAC CAGCAGCCGG
CGCACCCCCG TCGCCGCGAC GCCGGCCGTA CTCGCGAACC GCAAGGAGAA TGCATGA
|
|---|
| Protein sequence | MQRIALISEH ASPLGVIGGV DAGGQNIYVA NVAKQLAERG LDVDVYTRCD NAHLPEVVEI
GPRMRVIHVP AGPPVDVPKE RLLPYMGAFA DYMIARMRRE ADPVDVMHAN FFMSGDAALR
VKKRLGIPLV TTFHALGRVR RLHQGAADGF PDERFAIEDT LARRSDRLIA ECPQDALDLT
THYHADAARI DIVPCGFDAR EFRPVPRADA RAQLGWPQHA FVVLQLGRLV PRKGIDTVID
ALARMPRDPQ RPTRLYIVGG SHATPDPARD PELARLAALA HDTGIAERVI FVGRRERDVL
HLYYSAADVF VTTPWYEPFG ITPVEAMACA APVIGSDVGG IRTTVDDGVT GYLVPPRDPA
ALAQRLVQLR ARPDLCDALG RAGYLRAHRF YTWRGVADRL VDIYRDVAHP QRAGTATSSR
RTPVAATPAV LANRKENA
|
|---|
| |