Gene BamMC406_6388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6388 
Symbol 
ID6182533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp990571 
End bp991887 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content71% 
IMG OID641689512 
Productglycosyl transferase group 1 
Protein accessionYP_001816371 
Protein GI172065659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.570684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.371052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAA TTGCGTTGAT CAGTGAACAT GCGTCGCCGC TGGGAGTGAT CGGCGGCGTG 
GATGCGGGCG GACAGAACAT CTACGTCGCG AACGTCGCGA AGCAACTGGC CGAGCGCGGC
CTCGACGTCG ATGTCTACAC GCGTTGCGAC AATGCGCACC TGCCGGAAGT CGTGGAGATC
GGCCCGCGCA TGCGCGTGAT TCACGTGCCG GCCGGCCCGC CGGTCGACGT GCCGAAGGAG
CGGCTGCTGC CGTACATGGG TGCATTCGCC GACTACATGA TCGCGCGCAT GCGGCGCGAG
GCCGATCCAG TCGACGTGAT GCACGCGAAC TTCTTCATGT CGGGCGACGC CGCGCTGCGC
GTGAAGAAGC GCCTCGGCAT TCCGCTCGTC ACGACGTTCC ATGCGCTCGG GCGCGTGCGG
CGGCTGCATC AGGGCGCGGC CGACGGCTTT CCCGATGAAC GCTTCGCGAT CGAGGACACG
CTCGCGCGCC GCTCGGACCG GTTGATCGCC GAATGCCCGC AGGACGCGCT CGACCTGACC
ACGCACTATC ACGCGGACGC CGCGCGCATC GACATCGTGC CGTGCGGGTT CGATGCGCGC
GAATTCCGGC CGGTGCCGCG CGCCGACGCG CGCGCGCAGC TCGGCTGGCC GCAGCACGCA
TTCGTCGTGC TGCAGCTCGG GCGGCTCGTG CCGCGCAAGG GGATCGACAC CGTGATCGAC
GCGCTTGCGC GAATGCCACG CGACCCGCAG CGGCCGACGC GGCTCTATAT CGTCGGCGGC
AGCCACGCGA CGCCCGATCC GGCCCGCGAT CCGGAACTCG CGCGGCTCGC CGCGCTCGCG
CACGACACCG GCATCGCGGA ACGCGTGATC TTCGTCGGCC GGCGCGAGCG CGACGTGCTG
CACCTGTACT ACAGCGCGGC CGACGTGTTC GTGACGACGC CGTGGTACGA GCCATTCGGC
ATCACGCCGG TCGAGGCGAT GGCCTGCGCG GCGCCGGTGA TCGGCAGCGA CGTCGGCGGC
ATCCGCACCA CGGTCGACGA CGGCGTGACC GGCTACCTGG TGCCGCCGCG CGATCCGGCT
GCGCTCGCCC AGCGGCTCGT GCAGCTGCGC GCGCGCCCTG ACCTGTGCGA CGCGCTCGGC
CGCGCCGGCT ACCTGCGCGC GCACCGCTTC TATACGTGGC GCGGCGTGGC CGATCGCCTC
GTCGACATCT ACCGCGACGT CGCGCATCCG CAGCGCGCCG GCACGGCGAC CAGCAGCCGG
CGCACCCCCG TCGCCGCGAC GCCGGCCGTA CTCGCGAACC GCAAGGAGAA TGCATGA
 
Protein sequence
MQRIALISEH ASPLGVIGGV DAGGQNIYVA NVAKQLAERG LDVDVYTRCD NAHLPEVVEI 
GPRMRVIHVP AGPPVDVPKE RLLPYMGAFA DYMIARMRRE ADPVDVMHAN FFMSGDAALR
VKKRLGIPLV TTFHALGRVR RLHQGAADGF PDERFAIEDT LARRSDRLIA ECPQDALDLT
THYHADAARI DIVPCGFDAR EFRPVPRADA RAQLGWPQHA FVVLQLGRLV PRKGIDTVID
ALARMPRDPQ RPTRLYIVGG SHATPDPARD PELARLAALA HDTGIAERVI FVGRRERDVL
HLYYSAADVF VTTPWYEPFG ITPVEAMACA APVIGSDVGG IRTTVDDGVT GYLVPPRDPA
ALAQRLVQLR ARPDLCDALG RAGYLRAHRF YTWRGVADRL VDIYRDVAHP QRAGTATSSR
RTPVAATPAV LANRKENA