| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6383 |
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| Symbol | |
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| ID | 6182148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 986886 |
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| End bp | 987743 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689507 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001816366 |
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| Protein GI | 172065654 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.11398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.546447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGG CAAAGACCCC GCCGCCCCAG AAGCAGACGC AGCAGCCGGG CAGCGAGCGG
GACATGCATC CGAAGCCGCG CGACGAAGCG GCCGATTACG TCGGCAGCGG CAAGCTGGCA
GGCAAGGTCG CGCTCGTGAC CGGCGGCGAC AGCGGCATCG GTCGCGCGGT CGCGATCGGT
TTCGCGAAGG AGGGCGCGGA CGTCGCGATC GTCTACCTGA ACGAATCGGA CGATGCCGCG
CATACGAAGC GGCTGATCGA GCAGGCCGGC CGGCGCTGCG AGGCGATCGC ATGCGACATC
GGCGAGCGCC GCCAGGCGCG CGACGCCGTG GCGCGCACCG TCGAAAAGCT CGGCCGGCTC
GACGTGCTGG TGAACAACGC TGGCGAACAG CATCCGCAAC CCGGCATCGA GGACGTGACC
GAGGAACAGC TCGAGCGCAC GTTCCGCACG AACGTGTACG GGATGATCTT CTGCACGCAG
GCGGCGCTTC AGCACATGAA GCCCGGTGGA CGCATCGTCA ACACCGCGTC GGTCACCGCA
TATCACGGCA GCCCGAAGCT GCTCGACTAT TCGGCGACCA AGGGCGCGAT CGTCGCGTTC
ACGCGTTCGC TGTCGATCGA GCTGGCCGAG CGCGACATTC GCGTGAACGC CGTCGCGCCG
GGGCCGATCT GGACGCCGCT GATCCCGTCG ACCTTCAGCG CCGACGAAGT CGCGAAGTTC
GGCTCGAACG TGCCACTGAA GCGGCCGGGG CAGCCCGACG AGCTGATCGG CTGCTACGTG
CTGCTCGCAT CGGAAGGCGC GAGCTACATG ACGGGACAGA CATTGCATCC GAACGGCGGC
TCGATCGTCG GCGGCTGA
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| Protein sequence | MTTAKTPPPQ KQTQQPGSER DMHPKPRDEA ADYVGSGKLA GKVALVTGGD SGIGRAVAIG
FAKEGADVAI VYLNESDDAA HTKRLIEQAG RRCEAIACDI GERRQARDAV ARTVEKLGRL
DVLVNNAGEQ HPQPGIEDVT EEQLERTFRT NVYGMIFCTQ AALQHMKPGG RIVNTASVTA
YHGSPKLLDY SATKGAIVAF TRSLSIELAE RDIRVNAVAP GPIWTPLIPS TFSADEVAKF
GSNVPLKRPG QPDELIGCYV LLASEGASYM TGQTLHPNGG SIVGG
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