| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6375 |
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| Symbol | |
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| ID | 6182140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 980048 |
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| End bp | 980941 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641689499 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001816358 |
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| Protein GI | 172065646 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.185518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.429031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCG AAAACCTCAA CGATCTGCTC GTGTTTCTGG CCGTGGCGCG CGACCGGAGC
TTCACGCGCG CGGCGGCGCG GCTCGGCGTG TCGCAATCGG CGCTGAGCCA GACGGTGCGC
GATCTCGAGA CGCGCCTCGG CGTGCGGCTG CTCACGCGCA CGACGCGCAG CGTGTCGACG
ACCGAAGCGG GCGAGGAACT GTTTCAGGCC GTCGCGCCGC GCATCGACGA GATCGAGATG
AAGCTCGCCG CGGTGGCCGA TTTCCGCGAC AAGCCGGCCG GCGTCGTGCG GATCACGGCC
ACCGAGCATC CGATCGACAC GATCATCTGG CCGAAGCTCA GGCGCGTGCT GCCCGATTAC
CCCGATATCC GCGTCGAGCT GTCGGTCGAC TACGGGCTGT CGAACATCGT CGAGGAGCGC
TACGACATCG GCGTGCGCTA CGGCGACCAG GTCGCGAAGG ACATGATCGC GGTGCGCATC
AGCCCGGACA TCCGGATGAC GATGGTCGCG TCGCCGGCCT ATCTCGACGG CCGCAAGCCG
CCGAAGACGC CGCAGGACCT GCTCGATCAC GACTGCGTGA CGCTGCGGCT CGCGACCGCG
AAGGGCATCT ATGCGTGGGA GCTGAAGAAG GGCAGGAACG AGATCCAGGC GCGCGTGAAC
GGCCGCATCA CCTGCAATAC GCAACCGCAT ATGGTGCAGG CGGCGCTCGA CGGCTTCGGC
ATTGCGTTCG TCACCGAGGA CATCGTGCTC GACCACGTGC GCAGCGGGCA GCTGCGGATC
GTGATGCCGG ACTGGTGCCC GGTGTTTCCC GGCTATCACG CGTACTATCC GAGCCGCCGC
CAGGCGTCGC GCGCATTCTC GATCGTGATC GATGCGTTGC GGCATCGCGC ATAG
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| Protein sequence | MPRENLNDLL VFLAVARDRS FTRAAARLGV SQSALSQTVR DLETRLGVRL LTRTTRSVST
TEAGEELFQA VAPRIDEIEM KLAAVADFRD KPAGVVRITA TEHPIDTIIW PKLRRVLPDY
PDIRVELSVD YGLSNIVEER YDIGVRYGDQ VAKDMIAVRI SPDIRMTMVA SPAYLDGRKP
PKTPQDLLDH DCVTLRLATA KGIYAWELKK GRNEIQARVN GRITCNTQPH MVQAALDGFG
IAFVTEDIVL DHVRSGQLRI VMPDWCPVFP GYHAYYPSRR QASRAFSIVI DALRHRA
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