Gene BamMC406_6368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6368 
Symbol 
ID6182133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp971507 
End bp972346 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content64% 
IMG OID641689492 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001816351 
Protein GI172065639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCA TTCGAACGCC GCGCGTGCCA GGCTGGGCGG CACTCGCAAT GATGGCGGCG 
ACATTGCACG CTCCCGCCGC GTCGGCGGCT TCCGATGATG TGGTCGCGAC GGTGAACGGC
GTCGCGCTGC ATCGCGTCGA ACTGGACGAA GCGATGACCG GGCGCCCCGA ATCGGCTCGC
GGCGAAGTGT TGCAGGGGCT CGTCGCGCGC GAGCTGCTTC GTCAGGCAGC GGAGCGCGAC
GGTTTGGGTA ACGCACAACC CGTGCGCGCC GCCATGCAAA AAGCGAAAGT CGATACGGAG
AATCGGCTAT ACGTCGCCAG GCATTTGCCG ATGCAGCCGG TTACGGACGA CGAAGTTCGC
CAGCGCTACA ACGAAATCGT CAGCCAGATC GGACCGTACC AATACAAGGT CAGTCAAATG
TCGTTCGCCG ACGAACCGAC CGCTCGCTTT GCGCTGGCGT TGCTCGAAAA GGGTGAGTCG
TTCGCGAATG TCGCGACGCG CAGCCACGCA AGCGACGCGC AGACCAGTTG GATCAGCTTC
AGGCAGCCGG TGAAAGACGG CCAGACGCTC GGATTGCCGT TGCCGCTCGC GCAGGCACTC
GCGACGATGC AGCCCGGCCA GTTCACGAAC GCGCCATTGC ACGTCGGTGA CCGATTCATC
GTTGCGCGGC TCGACGAGCG GCGCGATACG GTCATCCCGT CGTATACGCA GGCCAGCGCC
GCAATGCGCA AGGCGATGGA AAGCAAACGC AACGGTGACG CCTTCGTCAC GTTCATCGGC
CAGCTTGCCC GAAAGGCCGA GATCCGGCCG GCTCAAATTC TGCGGAGTGC ATCGCAATGA
 
Protein sequence
MRSIRTPRVP GWAALAMMAA TLHAPAASAA SDDVVATVNG VALHRVELDE AMTGRPESAR 
GEVLQGLVAR ELLRQAAERD GLGNAQPVRA AMQKAKVDTE NRLYVARHLP MQPVTDDEVR
QRYNEIVSQI GPYQYKVSQM SFADEPTARF ALALLEKGES FANVATRSHA SDAQTSWISF
RQPVKDGQTL GLPLPLAQAL ATMQPGQFTN APLHVGDRFI VARLDERRDT VIPSYTQASA
AMRKAMESKR NGDAFVTFIG QLARKAEIRP AQILRSASQ