Gene BamMC406_6339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6339 
Symbol 
ID6182643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp941551 
End bp942876 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content71% 
IMG OID641689465 
Productsodium/hydrogen exchanger 
Protein accessionYP_001816324 
Protein GI172065612 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.096144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAA CGCTGTGGTA TCTGATCATC GGCGCGGTGC TGATGGGCAT GGGCGTCGCG 
ACGTCGGCGC TGCGCCGTCT GCCGTGCAGC ACCGCGATGA TCTATCTCGT GCTCGGCGTC
GCGCTCGGTC CGTCCGGCGT GGGGCTCCTC CACCTCGATA TCGAACGCGA CGCGCGGCTG
CTGCGCGAGA TCGTCGAGGT CGCGCTGCTG GTGTCGCTGT TCGCGATCGG GCTGCGGCTG
CGCGTGCCGC TGTCCGACAA GCTGTGGCTC GTGCCATGCC GGCTCGGGCT GCTCGCGATG
ATCGTCACCG TGCCGCTGCT CGCCGGCTGC GCGGTGCTGA CGCTCGGCCT CGGCTGGGGG
CCCGCGCTGC TGCTCGCGGC GATCCTCGCG CCGACCGACC CGGTGCTCGC GCACGACGTG
CAGGTGCACG ATCCCGGCGA CCGCGATCTG GTGCGCTTCG CGCTGTCCGG CGAAGGCGGG
ATGAACGACG GGATCGCGCT GCCCTTCGCG CTCGCGGGCC TCGCGCTGTG CGGCGTGCCC
GATACGCCGC ACGGGCCGCC GCCGTTGTCC GGCACGTTCG CGCTGGCCGT GCTGTGGGGC
ATCGCGGGCG CGGCCGCGAT CGGCGGGCTG CTCGGCGCGG CAACGACCAA GGCGATCGGC
CGGCTGCGCA CCCGCTATGC GCAGGCGCTC GGCTTCGAAG GCTTCTTCGC GCTCGCGCTG
ATCGTGCTGT CGTTCGGCGC CGCGCAGTTC GCGCATACGT TCGGCTTCAT CGCGACGTTC
GCCGCGGGCG TCGCGATGCG CCGCGTCGAG CATCGTGCGA GCGGCGATCG CCCGCCGCGC
GAAGTGATCG GCCAGGTCGA TTCGGAAGAC GTGAGCGCGA CCGAGAAACA TCCGGAGAAG
GTCCACGCGT TCATGGCCGA ATCGGTGCTC GATTTCACGA TCGAGCTCGA GCGGATCGCC
GAGGCGCTCG TGATGACGAT GATCGGCAGC GTGCTCGGCA CGCTGTCGGC CCCGCTCGTC
ACGTGGGGCG CGATTGCGCT GGCGCTCGTG CTGTTCGTCG CCGTGCGGCC GTTCGCGGTG
CTGCTGACGC TCACAGGTTC ACACGCGACG CTTGCGCAGC GGCGGCTGAT GGCCTGGTTC
GGGATACGCG GGATCGGTTC GTTCTACTAC CTGCTGTTCG CGCTCGAACA CGGGCCATCG
AGCACCGTGC GGCCACTCGC GGCGCCGGTG CTCGCCGTCG TGGTGGCGTC GGTAATCGCG
CACGGGATCT CCGCGACGCC GCTGATGGAC TGGTACTACC GGCTGCAGCA TCGGCGCGGA
CCCTGA
 
Protein sequence
MHETLWYLII GAVLMGMGVA TSALRRLPCS TAMIYLVLGV ALGPSGVGLL HLDIERDARL 
LREIVEVALL VSLFAIGLRL RVPLSDKLWL VPCRLGLLAM IVTVPLLAGC AVLTLGLGWG
PALLLAAILA PTDPVLAHDV QVHDPGDRDL VRFALSGEGG MNDGIALPFA LAGLALCGVP
DTPHGPPPLS GTFALAVLWG IAGAAAIGGL LGAATTKAIG RLRTRYAQAL GFEGFFALAL
IVLSFGAAQF AHTFGFIATF AAGVAMRRVE HRASGDRPPR EVIGQVDSED VSATEKHPEK
VHAFMAESVL DFTIELERIA EALVMTMIGS VLGTLSAPLV TWGAIALALV LFVAVRPFAV
LLTLTGSHAT LAQRRLMAWF GIRGIGSFYY LLFALEHGPS STVRPLAAPV LAVVVASVIA
HGISATPLMD WYYRLQHRRG P