Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_6335 |
Symbol | |
ID | 6182639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010557 |
Strand | - |
Start bp | 939344 |
End bp | 939892 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641689461 |
Product | PfpI family intracellular peptidase |
Protein accession | YP_001816320 |
Protein GI | 172065608 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.31961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.116394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGCA AGCTGGACCA TTGCAAGGTA GCGATACTCG CGGTCGACGG CTTCGAGGAA GCCGAGCTCG TCGAGCCGCA GCGCGTGCTG AAGGCGGAAG GCGCGCAGGT CGACGTGATC TCGCAGAAGC CCGGCGAGAT CCAGGGCTTC AGGCACGTCG ACAAGGGCGA TCGCGTGAAG GTCGACCATA CGTTCGACGA TGCGCGCATC GGCGATTACG ACGCGGTGGT ACTGCCGGGC GGCGTCGTCA ACGGCGACGC GATCCGGATG CTGCCGGCCG CGCGCGAATT CGTGACCGCG GCCGTCGGCG CGGGCAAGCC GATCGCGGCG ATCTGCCATG GCGGCTGGCT GCTCGTGTCG TCGGGGCTGG TCGAAGGCCG CACGATGACG AGCTGGCCGA GCCTGCAGGA CGACATCCGC AACGCGGGCG GCAAGTGGGT CGACGAGGAG GTGGTGCGTG ACGGCAACCT GATCACGAGC CGCAAGCCCG ACGACCTGCC TGCATTCAAC GGCGCGCTGG TGCAGTCCCT CGCGTCGCGA GGAGCGTGA
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Protein sequence | MTGKLDHCKV AILAVDGFEE AELVEPQRVL KAEGAQVDVI SQKPGEIQGF RHVDKGDRVK VDHTFDDARI GDYDAVVLPG GVVNGDAIRM LPAAREFVTA AVGAGKPIAA ICHGGWLLVS SGLVEGRTMT SWPSLQDDIR NAGGKWVDEE VVRDGNLITS RKPDDLPAFN GALVQSLASR GA
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