| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6324 |
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| Symbol | |
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| ID | 6182628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 926993 |
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| End bp | 928864 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641689450 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_001816309 |
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| Protein GI | 172065597 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0602063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCAC GCACCGCCCA TCCATCCGGC ACGCACGCGT TCGCATCGTC GTTCGGCGCG
ACCTGCGTCG ACGCGCAGCA CACCCGCTTC CGGCTGTGGG CGCCCGCGAG CCGCACGGCC
GCGGTCGAAC TACACGGCGA CGAGCGCATC GCGATGCAGG CCATCGGCGA CGGCTGGTTC
GAGGTCGTCG CGCGCTGCGG CGCCGGCACG CTGTACCGCT TCCTGCTCGA CGACGGTCTC
GCGGTGCCCG ATCCCGCGTC GCGCTTCCAG CCGTCCGACG TGCACGGCCC GAGCCAGGTC
ATCGATCCGA CCACGTACCG CTGGCGCAAC GACGCGTGGC GCGGCCGGCC GTGGCACGAG
ACGGTGCTGT ACGAGCTGCA CGTCGGTGCC TGCGGCGGCT ATGCGAGCGT CGAGCGGCGC
CTGGCCGACA TCGCCGCGCT CGGCGTGACC GCGCTCGAGC TGATGCCCGT CAACGCGTTC
CCCGGTGCAC GCAACTGGGG CTACGACGGC GTGCTGCCGT TCGCGCCCGC TGCGTCATAC
GGCCGGCCCG AGGAGCTGAA GGCGCTCGTC GACGCCGCGC ACGGGCTCGG ACTGCAGGTG
TTTCTCGACG TCGTGTACAA CCACTTCGGC CCCGACGGCA ACCTGCTGCC GCGCTATGCG
CCCGAATTTT TCCGCGCGGA CCGGCAGACC GCGTGGGGCC CGGCGATCGA TTTCTCGCGC
GCGCAGACGA CCGCGTTCTT CATCGACAAC GCGCTGTACT GGCTCGACGA ATTCCGTTTC
GACGGCCTGC GTATCGACGC CGCGCATGCG ATCGACGACG ATGCGTGGCT GCGCGAGCTG
GCACGGCGCG TGCGTACCCA TTTCGGCGAT GCGCGCCACG TGCATCTGGT GCTCGAGAAC
GAACGCAATA CCGCGAGCCT GCTCGGGCCC AACGGCTTCG ATGCGCAGTG GAACGACGAC
TTCCACAACA GCGCGCACGT GTTGCTGACC GGCGAGCGCG AAGGCTACTA CCGCGCGTAT
GCCGACGCGC CGCTGCGCCG TCTAGCGCGC ACGCTCGGCG AAGGGTTCGC GTATCAGGGC
GAGCCGTCGC CGCTGCATGG CGGCGCGCCG CGCGGCGAGC CGAGCGCGCA CCTGCCGCCG
ACCGCGTTCG TCACGTTCCT GCAGAACCAC GACCAGATCG GCAACCGCGC GTTCGGCGAA
CGGCTGCGCG CGCTCGCGAA CGACGACGCG GTGCGCGCCG CGACCGCGTT GATGCTGCTC
GCGCCGCAGA TCCCGCTGCT GTTCATGGGC GAGGAAGACG GCAGCACGCA GCCGTTCCAG
TTCTTCACCG ACTATCGCGG CGAGCTCGCC GATGCGGTGC GCGAAGGCCG TCGCCGCGAG
TTCGCCGCGT TTTCCGCGTT CGCCGATCCC GCGCACCGCG ATGCGATCCC CGATCCGAAC
GATGTCGCCA CGTTCGTGCG TTCGTCGCCG GCCCACGCGG ACGACGATGC GTGGCCCGAC
GCCGACGCAT GGCGGCATTT CTACCGCAGC GCGCTGACGG TGCGCGCGGC GCTGGTGACG
CCGCACCTGC CCGGCGCGCG CGCGCTCGGC GTCGAGTTGC TGGCGGGTCA CGTTAGCCCC
GACCCGGAGG CGCTCGTCGC GCGCTGGCGG CTCGGCGACG GCAGCACGCT GACGATCGCG
TTCAATCCCG GCTCGCACGA CGCGGTGCTG CCCGCGCTGC CGGTCGGCAA GATCGTGTTC
GAGACGCCGC CGCGCGCGCG CGACCGGCTC GCCGACCAAC GGCTGCCCCC TCGCACCTGC
ATCGCGTGGC GCGACGGCGC GGTCAATCAC GATGCGCTGA AACACCGCGC GAACGGGCAC
ACGCGACCAT GA
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| Protein sequence | MSSRTAHPSG THAFASSFGA TCVDAQHTRF RLWAPASRTA AVELHGDERI AMQAIGDGWF
EVVARCGAGT LYRFLLDDGL AVPDPASRFQ PSDVHGPSQV IDPTTYRWRN DAWRGRPWHE
TVLYELHVGA CGGYASVERR LADIAALGVT ALELMPVNAF PGARNWGYDG VLPFAPAASY
GRPEELKALV DAAHGLGLQV FLDVVYNHFG PDGNLLPRYA PEFFRADRQT AWGPAIDFSR
AQTTAFFIDN ALYWLDEFRF DGLRIDAAHA IDDDAWLREL ARRVRTHFGD ARHVHLVLEN
ERNTASLLGP NGFDAQWNDD FHNSAHVLLT GEREGYYRAY ADAPLRRLAR TLGEGFAYQG
EPSPLHGGAP RGEPSAHLPP TAFVTFLQNH DQIGNRAFGE RLRALANDDA VRAATALMLL
APQIPLLFMG EEDGSTQPFQ FFTDYRGELA DAVREGRRRE FAAFSAFADP AHRDAIPDPN
DVATFVRSSP AHADDDAWPD ADAWRHFYRS ALTVRAALVT PHLPGARALG VELLAGHVSP
DPEALVARWR LGDGSTLTIA FNPGSHDAVL PALPVGKIVF ETPPRARDRL ADQRLPPRTC
IAWRDGAVNH DALKHRANGH TRP
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