| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6323 |
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| Symbol | |
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| ID | 6182627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 924869 |
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| End bp | 926983 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641689449 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001816308 |
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| Protein GI | 172065596 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.431119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.149748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCG CCCTGCCTTC CCGTCTCGAA CCCGGCCGCT GCTATCCGCT CGGCGCCACG
TGGGACGGCC TTGGCACCAA CTTCGCGGTG TTTTCCGCGC ACGCGCAGCG CATCCAGCTG
TGCGTGTTCG ACCCGACCGG CCGCAAGGAA CTCGCGCGCC TCGACCTGCC CGAATGCACC
GACGAGGTGT GGCACGGCTA CCTGCCGAAC GCGCATCCGG GCACCGTGTA CGGCTTTCGC
GCGGATGGCC CTTACCAGCC GCAGCACGGC CATCGCTTCA ACCCGACCAA GCTGCTGCTC
GACCCGTACG CGCGCAAGCT CGTCGGCCAG TTCCGCTGGT CCGACGCGCT GTTCGGCTAT
CGCGTGCATT CGAACCGCGC GGACCTGTCG ATGGACCGCC GCGACTCGGC GCCCGCGATG
CCGAAGGCCG TGGTCGTCGA CGAGGCGTTC GACTGGCGCA ACGACCGGCG CCCGGACGTG
CCGTGGCGCA GCACCGTGAT CTACGAGACG CACGTGCGCG GCGCGTCGAT GCGTCGCGCC
GGGCTGCGCG TGCCGGAGCG CGGCACGTTC GCGTCGCTGT CGCATCCGGC GTTCATCGAT
CACCTGCTGT CGATCGGCGT GACGACGATC GAATTGCTGC CGGTGCACGC GTTCCTGCAG
CAGCGTGCGC TGGTGAACCG CGGGCTGCGC AATTACTGGG GCTACGACAC GGCCGCGTTC
TTCGCGCCGG AGCCGTCGTA CCTGACGACG CGGCGGCTCG ACGAAATGCG CATCGCGATC
CGGCAGTTGC ACGCGGCCGG CATCGAGGTC GTGCTCGACG TCGTCTACAA CCACACGTGT
GAAGGCAACG AGCTCGGCCC GACGCTGTCG TGGCGCGGCC TCGACAACGC GAGCTACTAT
CGGCTGCGGC CGGACGACCG GCGTTACCAC GTCGACGAGA CCGGCTGCGG CAACACGCTG
AACCTGTCGC ATCCGCGCGT CGTGCAGATG GTGATGGATT CGCTGCGCTA CTGGGCCACC
GCGTTCAACA TCGACGGCTT TCGGTTCGAC CTCGGTGTGA CGCTCGGCCG CGAGGATCAC
GGCTTCGAGC CCGGCGCGGG GTTTTTCGAC GCGTTGCGGC AGGATCCGGT GCTCGCGCAG
CGCAAGCTGA TCACCGAACC GTGGGACATC GGCCCCGGCG GCTATCAGCT GGGCCGTCAT
CCGCCCGGCT TCGCCGAATG GAACGACCGC TTTCGCGACA CGGTGCGGCG CTTCTGGCGC
GGCGATGCGG GCCAGCGCCC GGAGCTCGCC GCGCGGCTCG CGGGCTCCGC CGACCTGTTC
AACCACCAAC GGCGCCGGAC CTGGGCGTCG GTCAATTTCG TCACCGCGCA CGACGGCTTC
ACGCTCGCCG ATCTGGTGTC GTATGCGCAC AAGCACAACG AGGCCAACGG CGAGGACGAC
CGCGACGGCC GCGACGACAA CTGCAGCGCG AACTGGGGCG TCGAAGGCGC CACTGACGAT
GCGTCGATTC TCGACCTGCG CGCGCGTGTC GCGCGCTCGA TGCTCGCGAC GCTGTTTACC
GCGCTCGGCA CGCCGATGAT CGTCGCCGGC GACGAATTCG GCCGCACGCA GCACGGCAAC
AACAACGCGT ATTGCCAGGA TAACGAAATA TCGTGGCTCG ACTGGGACCT CGCGCACAGC
GAAGAAGGTG TCCAGATGAT CCGTTTCGTG TCGCGGCTCG CCGCGTTGCG GCGCATGTAC
CCGGTGATGT CGGCGCCGCG CTATCCGTCC GGCGACCGCG ACGGCGCGCC GGGCATGCGC
GAGATCGGCT GGTTCGACGA ACACGGCCTC GAGCTGAGCG TGCCCGCGTG GGAAGACGGC
GAGGGCCGCG CGCTGACGAT GCGGCGCGTC GGCACCGGCC GCACCGGGCG CACCGAGGCG
TTGCTCGTGA TGCTGAACGC ATCGGCCGGC ACCATCAAGT TCAAGCCGCC CGCACCGGTG
CTCGACTACC GCGTGCTGCT CGACACCGCG ACGCCCGACT CCGGCCCGCG CTCGTGGCCG
GATGCCGGCC TCGACGTCGC CGCGCACACG GCCGTGATCG CGGTCGCGGC CGTGCCACCC
GACCTGCCCT CGTGA
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| Protein sequence | MPTALPSRLE PGRCYPLGAT WDGLGTNFAV FSAHAQRIQL CVFDPTGRKE LARLDLPECT
DEVWHGYLPN AHPGTVYGFR ADGPYQPQHG HRFNPTKLLL DPYARKLVGQ FRWSDALFGY
RVHSNRADLS MDRRDSAPAM PKAVVVDEAF DWRNDRRPDV PWRSTVIYET HVRGASMRRA
GLRVPERGTF ASLSHPAFID HLLSIGVTTI ELLPVHAFLQ QRALVNRGLR NYWGYDTAAF
FAPEPSYLTT RRLDEMRIAI RQLHAAGIEV VLDVVYNHTC EGNELGPTLS WRGLDNASYY
RLRPDDRRYH VDETGCGNTL NLSHPRVVQM VMDSLRYWAT AFNIDGFRFD LGVTLGREDH
GFEPGAGFFD ALRQDPVLAQ RKLITEPWDI GPGGYQLGRH PPGFAEWNDR FRDTVRRFWR
GDAGQRPELA ARLAGSADLF NHQRRRTWAS VNFVTAHDGF TLADLVSYAH KHNEANGEDD
RDGRDDNCSA NWGVEGATDD ASILDLRARV ARSMLATLFT ALGTPMIVAG DEFGRTQHGN
NNAYCQDNEI SWLDWDLAHS EEGVQMIRFV SRLAALRRMY PVMSAPRYPS GDRDGAPGMR
EIGWFDEHGL ELSVPAWEDG EGRALTMRRV GTGRTGRTEA LLVMLNASAG TIKFKPPAPV
LDYRVLLDTA TPDSGPRSWP DAGLDVAAHT AVIAVAAVPP DLPS
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