| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6320 |
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| Symbol | |
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| ID | 6182624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | + |
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| Start bp | 915825 |
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| End bp | 919226 |
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| Gene Length | 3402 bp |
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| Protein Length | 1133 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641689446 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001816305 |
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| Protein GI | 172065593 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.330794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.20234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCA CACCACCCTT CGCTCCTCAC ATCTACTTCT GCGACGCCCG CCTCGTCGGC
CCGCTCGATG CATGGCCCGA CACGCTCCAG CACATCGCCG GCATGGGCTT CGACCACGTG
CTGATCGGCG GCTTCTGGGC CGCCAGCGTC GCGGGCTTCC CGCGCCACGT CGCCGATTTC
CACCGGCCGG CCGCGACGTT CACGACGCGC GCCGGTGCGC TCGAGACATT CTCGCGGCTC
GCGCAGCTCG CGCACGGCCA CGGGCTGCGC GTGCTGCTCG AAGTGGTGCC GGACCGCATC
GCGCGCGACA ACCCGCTGCG CGCCGAGCAT CCGGACTGGT ACGTCGAGCG CGCGCACGAC
GACGCGTTGA TCGATCCGCG CAGCGCCGCC CATGAAATGG ACATCGCGCA TGCCCAGGTC
GGGGAAGACG CCGCGCACGA CGCGCTGTCC GCGTGGTGGT GCACGCACCT CGCCACGTTC
GCGGATGCCG GTGCATCGGG TTTCCTGATC GACGCGCCGC ATCACCTGCC GGCCGCGTGG
TGGCCCGGCT GGCGCGCGGC GCTGCGCCGC GCGCGCCCGG ACGTCGCGGT GCTGGCCGGC
GTGCCCGGCC ATGCGCGCGA CGCGCTCGCC CAACTCGAAG CGGCGGGCTT CGATGCGGTG
TTCTCGTCGG TCCGCTGGTG GGACCTGCAC GCGCCGTGGT TCGTCGACGA ACACCGGCTG
CTGCGGCGCA TCGGCTCGCC GATCGCGTTT CCCGACGCAA TCGACGGCCC GCGCCTCGCC
GACAACTGGA ACACCGCGCC GGACGAGACG GTCGCCCGCG CGTACCACCG CGCGTTGTGG
ACCGCCGCCG CGGTCGGCAC CGGCTGGCTC GTGCCAATGG GCTTCGAGCG CGGCGTCACG
CTGCCGCTGA TGGCGCGCGA CGCGGACGCC GCACGCTTCC GCGCCGCGCT GGACGACGCG
CGCTTCGATC TGTCGGGCGC GATTGCCGAC GCGAATGCAT GGCGCCGCGC GACACCGCTC
GCGGCCGAGC GCGGCGAAAT CGCGCAACTG AGCGCGCCGG GCGCGCGCGC GACGGCGCTG
CTGCGCGGCA GCGGTCCGTC GCTCGAACAC GACGACACGG CGCTGCTGAT CGCGCTGAAT
CCCGATCTCG ACGCGCCGAC GCACGTCGAT CCCGCGGCGA TCCTGCCCGG CGTGCCGGGC
GGCTTCACGC ACGTCTCGCC GCCGAACGGC GCGCGCAAGC CGGCGCCCAC CGCGCCGGTC
GCGCTGCAAG CCTTCACGCT CGAGCCCGGC GGCTATGCGC TGCTCGACGC GCGGCGCGCG
CCGCCCGCGC TCGCTCGCAC CGATGCCGCG GGCGAGCGCA CCGCGCTGTC GGCCGCGCTC
GCGGCCGACC GGATCGCGAT CGAGCGCGTC GAGCCGGCGG TCGACGGCGG CCGCTTCGCG
ATCAAGCGCG TGATCGGCGA AACACTGGTT GTGCACGCAT CGATCTTCAT GGACGGCCAT
GCGCATCTCG CGGCCGCGCT GCAATGGCGG GCGGACGACG AGGACACATG GCGCGAAGTG
CCGTTCGTCG CGGAGCCGAA CGATCGCTGG CACGCGCGCA TCTCACTCGA CCGGCTCGGC
CGCCACGCGT TCCGCGTGAT CGCATGGCGC GACGACTGGG CGTCGCTCGT CACCGACATT
GCGAAGAAGC GCGCGGCCGG CCAGGACGTG ACGCTGGAGC TACGCGAGGC GCAACTGCTG
CTCGCGAGCG CGTTGAAGCA TGCCGATCCG GTCGACCGGC GCGCGCGCAC GCGGATGGAA
CAGCTTACGG CGGAATTCAA CGACGCATCG CCCGACAAGC GGCTCGAACT GCTCGGCGCG
TCCGCGCTCG CCGATGCGTA CGCGACGCTG CGCTACCGGC CGTTCGTCAC GCACGACGAT
GCCGTCTACC CGGTCGACGT CGAACGCCGC GCCGCGCGCT TCTCGAGCTG GTACGAGATG
TTCCCGCGCT CGGCGAGCAA CGACCCGCAC CGGCACGGCA CGTTCGACGA CGTGATCGCG
CAATTGCCGC GCATCCGCGA CATGGGTTTC GACGTGCTGT ATTTCCCGCC GATCCATCCG
ATCGGCACGA CGGCGCGCAA GGGCCGCAAC AACACGCTGA CGGCCGGCCC CGACGACGTC
GGTAGCCCGT ACGCGATCGG CTCGCCCGAA GGCGGCCACA CGGCCGTGCA TCCGCAGCTC
GGCACGCTCG CGTCGTTCCG CACGCTGGTC GACGCGGCGC ATGCGCAGGG GCTCGAGATC
GCGCTCGATT TCGCGATCCA GTGCTCGCCC GATCATCCGT GGCTCGCCGC GCATCCGGGA
TGGTTCGCGT GGCGGCCTGA CGGCTCGCTG CGCTATGCGG AGAATCCGCC GAAGCGCTAC
CAGGACATCG TGAACCCCGA TTTCTACGCG CCGGACGCGC TGCCGGACCT GTGGGTCGCG
CTGCGCGACG CGGTGCTGTT CTGGGTCGAC GCCGGCGTGC GGATCTTCCG CGTCGACAAT
CCGCACACGA AGCCGCTGCC GTTCTGGGCA TGGATGATCG CGGACGTGCG CGGCAAGCAT
CCGGACGTCG TGTTCCTGTC GGAGGCGTTC ACGCGGCCGG GGATGATGTA CCGGCTCGCG
AAGGTCGGCT TCTCGCAGTC GTACACGTAT TTCACGTGGC GCGAGACGAA GCGCGAATTC
ATCGACTACC TGACCGAGCT GACGGCCGGC CCCGCGCGCG AGTTCTTCCG GCCGAACTTC
TTCGTGAATA CGCCCGACAT CAATCCGCGC CACCTGCAGA ACGCGCCGCG CTCGCAGTTC
GTGATCCGCG CGGCGCTGGC GGCGACGCTC GCCGGGTCGT GGGGCCTGTA CTCGGGCTTC
GAGATCGGGG AATCGGCGCC GCTGCCCGAC AGCGAGGAAT ACGCGGACGC GGAGAAATAC
GAGCTGCGCG TGCGCGACTG GCGCAAGGCC GCGCACATCG GCGGCGAAAT CGCGCGGCTC
AATCGCGCGC GGCGCGACCA TCCGGCGCTG CAGACCCATC TCGGCCTCAC CTTCGTCGAT
GCGGACAACG ACCAGGTGCT GGTGTTCGTG AAGGCGACGC CCGCGCACGA CAGCGTCGTC
GCGGTCGCGA TCAGCCTCGA CCCGTGGCAT CCGCAGGCCG CGAATTTCAC GCTCGATGCG
GCGCTGTGGC GCGGCTTCGG GCTCATCGAC GGCGAACCGC TCGACGCGCT CGAGCAGGAC
GCCGCGCATG CCGAAACCTG GCGCGGGCAT CGCCAGTACG TATCGCTCGA CCCGCACGTG
CGGCCGTATG CGATCTGGCG GCTTGCGCCG TCTCCCGGCG CCGCGCGAGC GGCGGCGCCC
GACCCGGCCG ATGCCCGGGG CCATTCCGGA GCACACGGAT GA
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| Protein sequence | MNPTPPFAPH IYFCDARLVG PLDAWPDTLQ HIAGMGFDHV LIGGFWAASV AGFPRHVADF
HRPAATFTTR AGALETFSRL AQLAHGHGLR VLLEVVPDRI ARDNPLRAEH PDWYVERAHD
DALIDPRSAA HEMDIAHAQV GEDAAHDALS AWWCTHLATF ADAGASGFLI DAPHHLPAAW
WPGWRAALRR ARPDVAVLAG VPGHARDALA QLEAAGFDAV FSSVRWWDLH APWFVDEHRL
LRRIGSPIAF PDAIDGPRLA DNWNTAPDET VARAYHRALW TAAAVGTGWL VPMGFERGVT
LPLMARDADA ARFRAALDDA RFDLSGAIAD ANAWRRATPL AAERGEIAQL SAPGARATAL
LRGSGPSLEH DDTALLIALN PDLDAPTHVD PAAILPGVPG GFTHVSPPNG ARKPAPTAPV
ALQAFTLEPG GYALLDARRA PPALARTDAA GERTALSAAL AADRIAIERV EPAVDGGRFA
IKRVIGETLV VHASIFMDGH AHLAAALQWR ADDEDTWREV PFVAEPNDRW HARISLDRLG
RHAFRVIAWR DDWASLVTDI AKKRAAGQDV TLELREAQLL LASALKHADP VDRRARTRME
QLTAEFNDAS PDKRLELLGA SALADAYATL RYRPFVTHDD AVYPVDVERR AARFSSWYEM
FPRSASNDPH RHGTFDDVIA QLPRIRDMGF DVLYFPPIHP IGTTARKGRN NTLTAGPDDV
GSPYAIGSPE GGHTAVHPQL GTLASFRTLV DAAHAQGLEI ALDFAIQCSP DHPWLAAHPG
WFAWRPDGSL RYAENPPKRY QDIVNPDFYA PDALPDLWVA LRDAVLFWVD AGVRIFRVDN
PHTKPLPFWA WMIADVRGKH PDVVFLSEAF TRPGMMYRLA KVGFSQSYTY FTWRETKREF
IDYLTELTAG PAREFFRPNF FVNTPDINPR HLQNAPRSQF VIRAALAATL AGSWGLYSGF
EIGESAPLPD SEEYADAEKY ELRVRDWRKA AHIGGEIARL NRARRDHPAL QTHLGLTFVD
ADNDQVLVFV KATPAHDSVV AVAISLDPWH PQAANFTLDA ALWRGFGLID GEPLDALEQD
AAHAETWRGH RQYVSLDPHV RPYAIWRLAP SPGAARAAAP DPADARGHSG AHG
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