| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6302 |
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| Symbol | |
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| ID | 6182743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 893186 |
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| End bp | 894322 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641689429 |
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| Product | muconate and chloromuconate cycloisomerase |
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| Protein accession | YP_001816288 |
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| Protein GI | 172065576 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.564613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0132989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGA TCACCATCGA ACGCATTGAA ACCCGCCTCG TCGACCTGCC GACGATCCGT
CCGCACAAGC TGTCGGTCGC CACCATGCAC GGCCAGACGC TGATGCTGGT GAAGGTGCTC
TGCAGCGACG GCGTGACCGG CCTTGGCGAA GGCACGACGA TCGCCGGGAT GGCCTACGGC
CCGGAAAGCC CCGAAGCGAT GAAGCTCGCG ATCGACGCGT ACCTCGCGCC GGCCGTCATC
GGCCGCGATG CGACGCGCAT CCAGACGCTG ATGGCGTTCC TCGGCAAGCT CGCGAAGGTC
AATCACTTCG CGAAGAGCGC GCTCGAAACC GCGCTGCTCG ACGCGCACGG CAAGCGCCTC
GGCGTACCGG TCAGCGAGCT GCTCGGCGGT CGCCGGCGCG ATCGCCTGCC GGTCGCGTGG
ACGCTCGCAT CGGGCAACAC GGCGACCGAT ATCGCCGAGG CCGAGCGGAT GCTCGACCTG
CGTCGTCACA ACGTATTCAA GCTGAAGATC GGCGCGAAGG CGCTCGCCGA CGACATCCGG
CACGTGGCCG AGATCAAGCG GGCGCTCGGC GAGCGCGCAT CGGTGCGCGT CGACGTGAAC
ATGGCCTGGA GCGAAACGCA GGCGGCGCGC GCGATTCCGG CGCTGGCCGA TGCGGGTTGC
GAACTGGTCG AGCAGCCGGT GGCGTCGGCC GCGGCGCTCG CGCGCCTGAT GCGCCGTTTC
CCGGTCGCGC TGATGGCCGA TGAAATCCTG CAGGGCCCGG ACAGCGCGTT CGAGATCGCG
AAGCATCACG GCGCGGACGT GTTCGCGATC AAGATCGAGC AGAGCGGCGG CCTCTTTGCC
GCGCAGCGCG TCGCGGCGAT CGCGGATGCG GCCGGCATCG AGCTGTACGG CGGCACGATG
CTCGAAGGCG CGTTCAGCAC GGTCGCGTCC GCGCATCTGT TCGCGAGCTT CGCGAACCTG
CAGTGGGGCA CCGAATTGTT CGGACCGCTA CTGATCACCG AAGAAATTCT CACGACCCCG
CTCGACTACA GCGATTTCGA ATTGACCGTG CCGAGCGGCC CGGGCCTCGG CATCGAACTC
GACGAAGCGA AGGTCGCGCG CTTCACCCGC GACGGGCTAA CGAAAGTCTC CCGCTAA
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| Protein sequence | MSPITIERIE TRLVDLPTIR PHKLSVATMH GQTLMLVKVL CSDGVTGLGE GTTIAGMAYG
PESPEAMKLA IDAYLAPAVI GRDATRIQTL MAFLGKLAKV NHFAKSALET ALLDAHGKRL
GVPVSELLGG RRRDRLPVAW TLASGNTATD IAEAERMLDL RRHNVFKLKI GAKALADDIR
HVAEIKRALG ERASVRVDVN MAWSETQAAR AIPALADAGC ELVEQPVASA AALARLMRRF
PVALMADEIL QGPDSAFEIA KHHGADVFAI KIEQSGGLFA AQRVAAIADA AGIELYGGTM
LEGAFSTVAS AHLFASFANL QWGTELFGPL LITEEILTTP LDYSDFELTV PSGPGLGIEL
DEAKVARFTR DGLTKVSR
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